Evidence map›Paper›PMID 25536327›Full record

ArticlePloS one2014

Changes in cell wall properties coincide with overexpression of extensin fusion proteins in suspension cultured tobacco cells.

Li Tan, Yunqiao Pu, Sivakumar Pattathil, Utku Avci, Jin Qian, Allison Arter, Liwei Chen, Michael G Hahn, Arthur J Ragauskas, Marcia J Kieliszewski

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.9field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Li TanComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States of America; BioEnergy Science Center, University of Georgia, Athens, Georgia, United States of America.
Yunqiao PuBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America.
Sivakumar PattathilComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States of America; BioEnergy Science Center, University of Georgia, Athens, Georgia, United States of America.
Utku AvciComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States of America; BioEnergy Science Center, University of Georgia, Athens, Georgia, United States of America.
Jin QianComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States of America; BioEnergy Science Center, University of Georgia, Athens, Georgia, United States of America.
Allison ArterDepartment of Chemistry and Biochemistry, Ohio University, Athens, Ohio, United States of America.
Liwei ChenDepartment of Chemistry and Biochemistry, Ohio University, Athens, Ohio, United States of America; Suzhou Institute of Nano-Tech and Nano-Bionics (SINANO), Suzhou, China.
Michael G HahnComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States of America; BioEnergy Science Center, University of Georgia, Athens, Georgia, United States of America; Department of Plant Biology, University of Georgia, Athens, Georgia, United States of America.
Arthur J RagauskasBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America.
Marcia J KieliszewskiDepartment of Chemistry and Biochemistry, Ohio University, Athens, Ohio, United States of America.
University of Georgia · USOak Ridge National Laboratory · USOhio University · USSuzhou Institute of Nano-tech and Nano-bionics · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Extensins are one subfamily of the cell wall hydroxyproline-rich glycoproteins, containing characteristic SerHyp4 glycosylation motifs and intermolecular cross-linking motifs such as the TyrXaaTyr sequence. Extensins are believed to form a cross-linked network in the plant cell wall through the tyrosine-derivatives isodityrosine, pulcherosine, and di-isodityrosine. Overexpression of three synthetic genes encoding different elastin-arabinogalactan protein-extensin hybrids in tobacco suspension cultured cells yielded novel cross-linking glycoproteins that shared features of the extensins, arabinogalactan proteins and elastin. The cell wall properties of the three transgenic cell lines were all changed, but in different ways. One transgenic cell line showed decreased cellulose crystallinity and increased wall xyloglucan content; the second transgenic cell line contained dramatically increased hydration capacity and notably increased cell wall biomass, increased di-isodityrosine, and increased protein content; the third transgenic cell line displayed wall phenotypes similar to wild type cells, except changed xyloglucan epitope extractability. These data indicate that overexpression of modified extensins may be a route to engineer plants for bioenergy and biomaterial production.

Indexed as

Amino Acid SequenceBase SequenceCell WallGlycoproteinsGlycosylationMolecular Sequence DataMucoproteinsNicotianaPlant ProteinsPlants, Genetically ModifiedUp-Regulationarabinogalactan proteinsextensin protein, plantGlycoproteinsMucoproteinsPlant Proteins

Identifiers

PMID25536327
PMCPMC4275275
OpenAlexW2154840195

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.