Evidence map›Paper›PMID 25535378›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

B-cell repertoire responses to varicella-zoster vaccination in human identical twins.

Chen Wang, Yi Liu, Mary M Cavanagh, Sabine Le Saux, Qian Qi, Krishna M Roskin, Timothy J Looney, Ji-Yeun Lee, Vaishali Dixit, Cornelia L Dekker and 3 more

Registry-linked trialOpen access · bronzeAbstract readTwin Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT01911065 (T Cell Responses to Varicella Zoster Virus After Vaccination and Viral Escape), which is not on this map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01911065 phase4completednot on this map

T Cell Responses to Varicella Zoster Virus After Vaccination and Viral Escape

TypeinterventionalSponsorStanford UniversityRan2010 to 2011Enrolled54ConditionsHerpes ZosterArmsZostavax™
3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 108 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Article
  4. Explore antibody repertoire in the era of AI.Acta biochimica et biophysica Sinica · 2025
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Computational detection of antigen-specific B cell receptors following immunization.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. How repertoire data are changing antibody science.The Journal of biological chemistry · 2020
    Review
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Chen WangDepartment of Pathology.
Yi LiuDepartment of Pathology, Biomedical Informatics Training Program.
Mary M CavanaghDivision of Immunology and Rheumatology, Department of Medicine.
Sabine Le SauxDivision of Immunology and Rheumatology, Department of Medicine.
Qian QiDivision of Immunology and Rheumatology, Department of Medicine.
Krishna M RoskinDepartment of Pathology.
Timothy J LooneyDepartment of Pathology.
Ji-Yeun LeeDepartment of Pathology.
Vaishali DixitDepartment of Pathology.
Cornelia L DekkerDepartment of Pediatrics, and.
Gary E SwanStanford Prevention Research Center, Stanford University, Stanford, CA 94305; and.
Jörg J GoronzyDivision of Immunology and Rheumatology, Department of Medicine, Department of Medicine, Veterans Affairs Palo Alto Health Care System, Palo Alto, CA 94304.
Scott D BoydDepartment of Pathology, sboyd1@stanford.edu.
Center for Rheumatology · USPediatrics and Genetics · USStanford University · USVA Palo Alto Health Care System · US

Funding

Using a tonsil organoid system to probe conditions for the induction of protective antibody and T cell responses to influenza.U19AI057229 · NIAID · STANFORD UNIVERSITY · PI Mark Morris Davis · 2003 to 2026
$88.5M
VACCINE INDUCED IMMUNITY IN THE YOUNG AND AGEDU19AI057266 · NIAID · EMORY UNIVERSITY · PI Rafi Ahmed · 2003 to 2026
$81.7M
Spectrum Stanford Center for clinical and Translational Research and EducationUL1TR001085 · NCATS · STANFORD UNIVERSITY · PI CULLEN, MARK RICHARD, GREENBERG, HARRY BERNARD · 2013 to 2017
$37.1M
POSTDOCTORAL TRAINING IN MEDICAL INFORMATION SCIENCEST15LM007033 · NLM · STANFORD UNIVERSITY · PI SYLVIA KATINA PLEVRITIS · 1985 to 2026
$25.5M
Stanford Center for Clinical and Translational Education and Research (SCCTER)UL1UL1RR025744 · NCRR · STANFORD UNIVERSITY · PI GREENBERG, HARRY BERNARD · 2008 to 2011
$22.4M
Vaccination and infection: indicators of immunological health and responsivenessU19AI090019 · NIAID · STANFORD UNIVERSITY · PI DAVIS, MARK MORRIS · 2010 to 2015
$17.3M
microRNA Regulation of T Cell SenescenceR01AI108891 · NIAID · PALO ALTO VETERANS INSTIT FOR RESEARCH · PI GORONZY, JORG J · 2014 to 2023
$4.6M
Influence of Age on CD4 T Memory CellsR01AG045779 · NIA · PALO ALTO VETERANS INSTIT FOR RESEARCH · PI GORONZY, JORG J · 2013 to 2023
$4.0M
T CELLS AND AGINGR01AG015043 · NIA · PALO ALTO VETERANS INSTIT FOR RESEARCH · PI GORONZY, JORG J · 1998 to 2008
$2.1M
PHARMACOKINETICS OF NICOTINE IN TWINSR01DA011170 · NIDA · SRI INTERNATIONAL · PI SWAN, GARY E · 1998 to 2002
$1.5M
Opioid Efficacy In Humans: A Twin StudyR01DA023063 · NIDA · STANFORD UNIVERSITY · PI ANGST, MARTIN STEPHAN, CLARK, DAVID J. · 2008 to 2010
$1.4M
Effects of Tobacco Exposure on Immune ResponsesR21ES022153 · NIEHS · STANFORD UNIVERSITY · PI NADEAU, KARI C. · 2013 to 2014
$471k
NCATS NIH HHS UL1 TR001085NCRR NIH HHS UL1 RR025744NIAID NIH HHS AI057229NIAID NIH HHS AI090019NIAID NIH HHS R01 AI108891NIAID NIH HHS U19 AI057229NIAID NIH HHS U19 AI057266NIAID NIH HHS U19 AI090019NIA NIH HHS R01 AG015043NIA NIH HHS R01 AG045779NIDA NIH HHS DA011170NIDA NIH HHS DA023063NIDA NIH HHS R01 DA011170NIDA NIH HHS R01 DA023063NIEHS NIH HHS ES022153NIEHS NIH HHS R21 ES022153NLM NIH HHS T15 LM007033
6 · The paper itself

Abstract

Adaptive immune responses in humans rely on somatic genetic rearrangements of Ig and T-cell receptor loci to generate diverse antigen receptors. It is unclear to what extent an individual's genetic background affects the characteristics of the antibody repertoire used in responding to vaccination or infection. We studied the B-cell repertoires and clonal expansions in response to attenuated varicella-zoster vaccination in four pairs of adult identical twins and found that the global antibody repertoires of twin pair members showed high similarity in antibody heavy chain V, D, and J gene segment use, and in the length and features of the complementarity-determining region 3, a major determinant of antigen binding. These twin similarities were most pronounced in the IgM-expressing B-cell pools, but were seen to a lesser extent in IgG-expressing B cells. In addition, the degree of antibody somatic mutation accumulated in the B-cell repertoire was highly correlated within twin pair members. Twin pair members had greater numbers of shared convergent antibody sequences, including mutated sequences, suggesting similarity among memory B-cell clonal lineages. Despite these similarities in the memory repertoire, the B-cell clones used in acute responses to ZOSTAVAX vaccination were largely unique to each individual. Taken together, these results suggest that the overall B-cell repertoire is significantly shaped by the underlying germ-line genome, but that stochastic or individual-specific effects dominate the selection of clones in response to an acute antigenic stimulus.

Indexed as

Antibodies, ViralB-LymphocytesCohort StudiesComplementarity Determining RegionsFemaleHerpesvirus 3, HumanHerpes Zoster VaccineHumansImmunoglobulin GImmunoglobulin Heavy ChainsImmunoglobulin MImmunologic MemoryMaleMiddle AgedMutationTwins, MonozygoticAntibodies, ViralComplementarity Determining RegionsHerpes Zoster VaccineImmunoglobulin GImmunoglobulin Heavy ChainsImmunoglobulin MantibodyB cell repertoireconvergenttwinVaricella Zoster vaccine

Identifiers

PMID25535378
PMCPMC4299233
OpenAlexW2021117977

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.