Evidence map›Paper›PMID 25535081›Full record

ArticleInternational journal of molecular sciences2014

Candida parapsilosis biofilm identification by Raman spectroscopy.

Ota Samek, Katarina Mlynariková, Silvie Bernatová, Jan Ježek, Vladislav Krzyžánek, Martin Šiler, Pavel Zemánek, Filip Růžička, Veronika Holá, Martina Mahelová

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Genotypic and Phenotypic Characterisation ofPathogens (Basel, Switzerland) · 2026
    Article
  3. Article
  4. Article
  5. Raman Spectroscopy of OralInternational journal of molecular sciences · 2022
    Article
  6. Review
  7. Article
  8. Raman Imaging of PathogenicFrontiers in microbiology · 2021
    Article
  9. Comparative Proteome Analysis ofFrontiers in microbiology · 2020
    Article
  10. Article
  11. Article
  12. MonitoringSensors (Basel, Switzerland) · 2018
    Article
  13. Article
  14. Article
  15. Article
  16. Copper-tolerant yeasts: Raman spectroscopy in determination of bioaccumulation mechanism.Environmental science and pollution research international · 2017
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ota SamekInstitute of Scientific Instruments of the Academy of Sciences of the Czech Republic, v.v.i., Královopolská 147, Brno 61264, Czech Republic. osamek@isibrno.cz.
Katarina MlynarikováDepartment of Microbiology, Faculty of Medicine and St. Anne's Faculty Hospital, Brno 65691, Czech Republic. k.mlynarikova@gmail.com.
Silvie BernatováInstitute of Scientific Instruments of the Academy of Sciences of the Czech Republic, v.v.i., Královopolská 147, Brno 61264, Czech Republic. berns@isibrno.cz.
Jan JežekInstitute of Scientific Instruments of the Academy of Sciences of the Czech Republic, v.v.i., Královopolská 147, Brno 61264, Czech Republic. jezek@isibrno.cz.
Vladislav KrzyžánekInstitute of Scientific Instruments of the Academy of Sciences of the Czech Republic, v.v.i., Královopolská 147, Brno 61264, Czech Republic. vlk@isibrno.cz.
Martin ŠilerInstitute of Scientific Instruments of the Academy of Sciences of the Czech Republic, v.v.i., Královopolská 147, Brno 61264, Czech Republic. siler@isibrno.cz.
Pavel ZemánekInstitute of Scientific Instruments of the Academy of Sciences of the Czech Republic, v.v.i., Královopolská 147, Brno 61264, Czech Republic. pavlik@isibrno.cz.
Filip RůžičkaDepartment of Microbiology, Faculty of Medicine and St. Anne's Faculty Hospital, Brno 65691, Czech Republic. fruzic@fnusa.cz.
Veronika HoláDepartment of Microbiology, Faculty of Medicine and St. Anne's Faculty Hospital, Brno 65691, Czech Republic. veronika.hola@fnusa.cz.
Martina MahelováDepartment of Microbiology, Faculty of Medicine and St. Anne's Faculty Hospital, Brno 65691, Czech Republic. martina.mahelova@fnusa.cz.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colonies of Candida parapsilosis on culture plates were probed directly in situ using Raman spectroscopy for rapid identification of specific strains separated by a given time intervals (up to months apart). To classify the Raman spectra, data analysis was performed using the approach of principal component analysis (PCA). The analysis of the data sets generated during the scans of individual colonies reveals that despite the inhomogeneity of the biological samples unambiguous associations to individual strains (two biofilm-positive and two biofilm-negative) could be made.

Indexed as

BiofilmsSpectrum Analysis, RamanCandida

Identifiers

PMID25535081
PMCPMC4284798

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.