Evidence map›Paper›PMID 25533289›Full record

ArticleImmunology and cell biology

A microRNA expression atlas of mouse dendritic cell development.

Timothy M Johanson, Marek Cmero, James Wettenhall, Andrew M Lew, Yifan Zhan, Mark M W Chong

Abstract read
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In one paragraph

Article in Immunology and cell biology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Timothy M Johanson1] Walter and Eliza Hall Institute of Medical Research, Parkville, Victoria, Australia [2] Department of Medical Biology, University of Melbourne, Parkville, Victoria, Australia [3] Immunology and Diabetes, St Vincent's Institute of Medical Research, Fitzroy, Victoria, Australia.
Marek CmeroImmunology and Diabetes, St Vincent's Institute of Medical Research, Fitzroy, Victoria, Australia.
James WettenhallWalter and Eliza Hall Institute of Medical Research, Parkville, Victoria, Australia.
Andrew M Lew1] Walter and Eliza Hall Institute of Medical Research, Parkville, Victoria, Australia [2] Department of Medical Biology, University of Melbourne, Parkville, Victoria, Australia.
Yifan Zhan1] Walter and Eliza Hall Institute of Medical Research, Parkville, Victoria, Australia [2] Department of Medical Biology, University of Melbourne, Parkville, Victoria, Australia.
Mark M W Chong1] Immunology and Diabetes, St Vincent's Institute of Medical Research, Fitzroy, Victoria, Australia [2] Department of Medicine (St Vincent's), University of Melbourne, Fitzroy, Victoria, Australia.
Walter and Eliza Hall Institute of Medical Research · AUUniversity of Melbourne · AUSt Vincents Institute of Medical Research · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dendritic cells (DCs) are sentinel cells of the immune system and are essential for inducing a proper immune response. The mechanisms driving the development of DCs are not fully understood. Although the roles of cytokines and transcription factors have been a major focus, there is now substantial interest in the role of microRNAs (miRNAs). miRNAs are small RNAs that regulate gene expression by targeting messenger RNAs for translational repression and ultimately degradation. By means of deep sequencing, we have assembled a comprehensive and quantitative resource of miRNA expression during DC development. We show that mature DCs and their hematopoietic progenitors can be distinguished based on miRNA expression profiles. On the other hand, we show that functionally distinct conventional and plasmacytoid DC subsets are indistinguishable based on miRNA profile. In addition, we identify differences between ex vivo purified conventional DCs and their in vitro Flt3L-generated counterparts. This miRNA expression atlas will provide a valuable resource for the study of miRNAs in DC development and function.

Indexed as

AnimalsCell DifferentiationCell LineageCells, CulturedDendritic CellsGene Expression ProfilingHematopoiesisHematopoietic Stem CellsMiceMice, Inbred C57BLMicroRNAsMultigene FamilyVascular Endothelial Growth Factor Receptor-3MicroRNAsVascular Endothelial Growth Factor Receptor-3

Identifiers

PMID25533289
OpenAlexW1966375922

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.