Evidence map›Paper›PMID 25533207›Full record

ArticleDevelopmental cell2015

The Pallbearer E3 ligase promotes actin remodeling via RAC in efferocytosis by degrading the ribosomal protein S6.

Hui Xiao, Hui Wang, Elizabeth A Silva, James Thompson, Aurélien Guillou, John R Yates, Nicolas Buchon, Nathalie C Franc

Open access · bronzeAbstract read
In one paragraph

Article in Developmental cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. The Ubiquitin-Proteasome System in Apoptosis and Apoptotic Cell Clearance.Frontiers in cell and developmental biology · 2022
    Review
  8. Ribosomal Protein S6: A Potential Therapeutic Target against Cancer?International journal of molecular sciences · 2021
    Review
  9. Article
  10. Review
  11. Article
  12. Genetics · 2019
    Review
  13. Article
  14. Review
  15. Apoptotic Cell Clearance inFrontiers in immunology · 2017
    Review
  16. Review
  17. Article
  18. Phagocytosis genes nonautonomously promote developmental cell death in the Drosophila ovary.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Hui XiaoDepartment of Immunology and Microbial Science and Department of Cell and Molecular Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Hui WangDepartment of Immunology and Microbial Science and Department of Cell and Molecular Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Elizabeth A SilvaMedical Research Council Laboratory for Molecular Cell Biology, London WC1E 6BT, UK.
James ThompsonDepartment of Chemical Physiology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Aurélien GuillouDepartment of Entomology, Cornell University, Ithaca, NY 14853, USA.
John R YatesDepartment of Chemical Physiology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Nicolas BuchonDepartment of Entomology, Cornell University, Ithaca, NY 14853, USA.
Nathalie C FrancDepartment of Immunology and Microbial Science and Department of Cell and Molecular Biology, The Scripps Research Institute, La Jolla, CA 92037, USA; Medical Research Council Laboratory for Molecular Cell Biology, London WC1E 6BT, UK. Electronic address: nfranc@scripps.edu.
Scripps Research Institute · USCornell University · USMRC Laboratory for Molecular Cell Biology · GB

Funding

ZDS2P REGULATES SWE1P-DEPENDENT POLARIZED CELL GROWTH IN S CEREVISIAEP41RR011823 · NCRR · UNIVERSITY OF WASHINGTON · PI FIELDS, STANLEY · 1996 to 2011
$24.7M
TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI YATES III, JOHN R · 2012 to 2021
$20.7M
Resource Component: Acquisition, maintenance and distribution of Drosophila stocksP40OD018537 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Annette L. Parks · 2014 to 2026
$13.5M
Apoptotic Cell-Induced Macrophage Signaling Pathways that Regulate PhagocytosisR01AI093687 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI FRANC, NATHALIE CLAUDINE · 2012 to 2016
$2.3M
Medical Research CouncilNCRR NIH HHS P41 RR011823NIAID NIH HHS R01 AI093687NIAID NIH HHS R01 AI093687-01A1NIGMS NIH HHS P41 GM103533NIH HHS NIH P40OD018537NIH HHS P40 OD018537
6 · The paper itself

Abstract

Clearance of apoptotic cells (efferocytosis) is achieved through phagocytosis by professional or amateur phagocytes. It is critical for tissue homeostasis and remodeling in all animals. Failure in this process can contribute to the development of inflammatory autoimmune or neurodegenerative diseases. We found previously that the PALL-SCF E3-ubiquitin ligase complex promotes apoptotic cell clearance, but it remained unclear how it did so. Here we show that the F-box protein PALL interacts with phosphorylated ribosomal protein S6 (RpS6) to promote its ubiquitylation and proteasomal degradation. This leads to RAC2 GTPase upregulation and activation and F-actin remodeling that promotes efferocytosis. We further show that the specific role of PALL in efferocytosis is driven by its apoptotic cell-induced nuclear export. Finding a role for RpS6 in the negative regulation of efferocytosis provides the opportunity to develop new strategies to regulate this process.

Indexed as

Actin CytoskeletonAnimalsAnimals, Genetically ModifiedDrosophila melanogasterImmunoprecipitationPhagocytosisPhosphorylationProteasome Endopeptidase Complexrac GTP-Binding ProteinsRibosomal Protein S6Signal TransductionTandem Mass SpectrometryUbiquitinationUbiquitin-Protein LigasesProteasome Endopeptidase Complexrac GTP-Binding ProteinsRibosomal Protein S6Ubiquitin-Protein Ligases

Identifiers

PMID25533207
PMCPMC4293263
OpenAlexW2102781654

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.