Evidence map›Paper›PMID 25531179›Full record

ArticleNeuroendocrinology2015

Neuroendocrine Merkel cell carcinoma is associated with mutations in key DNA repair, epigenetic and apoptosis pathways: a case-based study using targeted massively parallel sequencing.

Christian A Graves, Ashley Jones, Justin Reynolds, Jeremy Stuart, Lucia Pirisi, Peter Botrous, James Wells

Open access · bronzeAbstract read
In one paragraph

Article in Neuroendocrinology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. MGMT promoter methylation status in Merkel cell carcinoma: in vitro versus invivo.Journal of cancer research and clinical oncology · 2017
    Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Christian A GravesUniversity of South Carolina School of Medicine, Columbia, S.C., USA.
Ashley Jones
Justin Reynolds
Jeremy Stuart
Lucia Pirisi
Peter Botrous
James Wells
University of South Carolina · USWm. Jennings Bryan Dorn VA Medical Center · US

Funding

Role of HPV in Head and Neck Cancer in African Am & European Am PatientsP20MD001770 · NIMHD · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI CREEK, KIM E, GLOVER, SAUNDRA H · 2005 to 2014
$15.0M
NIMHD NIH HHS 1P20MD001770NIMHD NIH HHS P20 MD001770
6 · The paper itself

Abstract

introductionMerkel cell carcinoma (MCC) is a rare neuroendocrine carcinoma with a poorly understood molecular etiology. We implemented a comprehensive deep sequencing approach to identify mutations in the tumor DNA from a cohort of patients treated at our institution over the past 15 years. Our results indicate mutations that may constitute therapeutic targets in MCC.

methodsFive patients were treated for MCC within the study interval. Patients with adequate tissue (n = 4), positive neuroendocrine differentiation (chromogranin, synaptophysin, and cytokeratin 20), and histopathological confirmation of MCC were included in the study. DNA was extracted from archival tumor tissue samples and analyzed by massively parallel sequencing using a targeted, multiplex PCR approach followed by semiconductor sequencing.

resultsWe demonstrate high-penetrance nonsense mutations in PDE4DIP (n = 4) as well as various missense mutations in the DNA damage response (PRKDC, AURKB, ERCC5, ATR, and ATRX) and epigenetic modulating enzymes (MLL3).

conclusionWe describe several mutations in potential disease-relevant genes and pathways. These targets should be evaluated in a larger cohort to determine their role in the molecular pathogenesis of MCC.

Indexed as

MutationAged, 80 and overApoptosisCarcinoma, Merkel CellCarcinoma, NeuroendocrineCase-Control StudiesDNA RepairEpigenesis, GeneticHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedRetrospective StudiesSkin NeoplasmsWhite People

Identifiers

PMID25531179
PMCPMC4431917
OpenAlexW2042366225

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.