Evidence map›Paper›PMID 25530493›Full record

ArticleMitochondrion2015

Comparison of proteomic and metabolomic profiles of mutants of the mitochondrial respiratory chain in Caenorhabditis elegans.

P G Morgan, R Higdon, N Kolker, A T Bauman, O Ilkayeva, C B Newgard, E Kolker, L M Steele, M M Sedensky

Abstract read
In one paragraph

Article in Mitochondrion, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Lipidomic Analysis ofBio-protocol · 2017
    Article
  10. Article
  11. From the Cover: Arsenite Uncouples Mitochondrial Respiration and Induces a Warburg-like Effect in Caenorhabditis elegans.Toxicological sciences : an official journal of the Society of Toxicology · 2016
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

P G MorganDepartment of Anesthesiology and Pain Medicine, University of Washington, USA; Center for Developmental Therapeutics, Seattle Children's Research Institute, USA. Electronic address: pgm4@uw.edu.
R HigdonBioinformatics and High-throughput Analysis Laboratory, USA; High-throughput Analysis Core, Seattle Children's Research Institute, USA; Data-Enabled Life Sciences Alliance (DELSA Global), USA.
N KolkerHigh-throughput Analysis Core, Seattle Children's Research Institute, USA; Data-Enabled Life Sciences Alliance (DELSA Global), USA.
A T BaumanBioinformatics and High-throughput Analysis Laboratory, USA.
O IlkayevaSarah W. Stedman Nutrition and Metabolism Center & Duke Molecular Physiology Institute, Department of Pharmacology and Cancer Biology, Duke University Medical Center, Durham, NC, USA; Sarah W. Stedman Nutrition and Metabolism Center & Duke Molecular Physiology Institute, Department of Medicine, Duke University Medical Center, Durham, NC, USA.
C B NewgardSarah W. Stedman Nutrition and Metabolism Center & Duke Molecular Physiology Institute, Department of Pharmacology and Cancer Biology, Duke University Medical Center, Durham, NC, USA; Sarah W. Stedman Nutrition and Metabolism Center & Duke Molecular Physiology Institute, Department of Medicine, Duke University Medical Center, Durham, NC, USA.
E KolkerBioinformatics and High-throughput Analysis Laboratory, USA; High-throughput Analysis Core, Seattle Children's Research Institute, USA; Data-Enabled Life Sciences Alliance (DELSA Global), USA; Department of Biomedical Informatics & Medical Education, University of Washington, Seattle, WA, USA; Department of Pediatrics, University of Washington, Seattle, WA, USA; Department of Chemistry and Chemical Biology, College of Science, Northeastern University, Boston, MA 02115, USA.
L M SteeleCenter for Developmental Therapeutics, Seattle Children's Research Institute, USA.
M M SedenskyDepartment of Anesthesiology and Pain Medicine, University of Washington, USA; Center for Developmental Therapeutics, Seattle Children's Research Institute, USA.

Funding

Coordinating Center for Beta Cell Biology ConsortiumU01DK072473 · NIDDK · VANDERBILT UNIVERSITY · PI MAGNUSON, MARK A · 2005 to 2014
$61.0M
TARGETED RESPONSIVE MR AND PET AGENTS FOR B-CELL IMAGINGP01DK058398 · NIDDK · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI MUOIO, DEBORAH M · 2000 to 2016
$26.1M
MITOCHONDRIAL EFFECTS ON SENSITIVITY TO ANESTHETICSR01GM058881 · NIGMS · SEATTLE CHILDREN'S HOSPITAL · PI SEDENSKY, MARGARET MARY · 1999 to 2009
$3.9M
Signaling and Epigenetic Control of Beta Cell Development and RegenerationU01DK089571 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI ZARET, KENNETH · 2010 to 2011
$1.6M
Interaction of ubiquinone &complex I control longevityR01AG026073 · NIA · SEATTLE CHILDREN'S HOSPITAL · PI MORGAN, PHILIP G · 2005 to 2009
$1.5M
Anesthetic effects in mitochondrial diseaseR01GM075184 · NIGMS · SEATTLE CHILDREN'S HOSPITAL · PI MORGAN, PHILIP G · 2006 to 2008
$672k
NIA NIH HHS AG026073NIA NIH HHS R01 AG026073NIDDK NIH HHS P01 DK058398NIDDK NIH HHS P01 DK058398.NIDDK NIH HHS U01 DK072473NIDDK NIH HHS U01DK072473NIDDK NIH HHS U01 DK089571NIDDK NIH HHS U01DK089571NIGMS NIH HHS GM58881NIGMS NIH HHS R01 GM058881NIGMS NIH HHS R01 GM075184
6 · The paper itself

Abstract

Single-gene mutations that disrupt mitochondrial respiratory chain function in Caenorhabditis elegans change patterns of protein expression and metabolites. Our goal was to develop useful molecular fingerprints employing adaptable techniques to recognize mitochondrial defects in the electron transport chain. We analyzed mutations affecting complex I, complex II, or ubiquinone synthesis and discovered overarching patterns in the response of C. elegans to mitochondrial dysfunction across all of the mutations studied. These patterns are in KEGG pathways conserved from C. elegans to mammals, verifying that the nematode can serve as a model for mammalian disease. In addition, specific differences exist between mutants that may be useful in diagnosing specific mitochondrial diseases in patients.

Indexed as

MetabolomeMutationAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsElectron Transport Chain Complex ProteinsMitochondriaMitochondrial ProteinsProteomeCaenorhabditis elegans ProteinsElectron Transport Chain Complex ProteinsMitochondrial ProteinsProteomeC. elegansGene expressionGeneticsMetabolomicsMitochondriaProteomics

Identifiers

PMID25530493
PMCPMC4305019

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.