Evidence map›Paper›PMID 25528581›Full record

ArticleBMC veterinary research2014

The deletion of an extra six nucleotides in the 5' -untranslated region of the nucleoprotein gene of Newcastle disease virus NA-1 decreases virulence.

Jiaxu Liu, Yanlong Cong, Renfu Yin, Chan Ding, Shengqing Yu, Xiufan Liu, Chunfeng Wang, Zhuang Ding

Open access · goldAbstract read
In one paragraph

Article in BMC veterinary research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Jiaxu LiuLaboratory of Infectious Diseases, College of Veterinary Medicine, Jilin University, Changchun, 130062, China. jiaxuliu99@hotmai.com.
Yanlong CongLaboratory of Infectious Diseases, College of Veterinary Medicine, Jilin University, Changchun, 130062, China. congyanlong@126.com.
Renfu YinLaboratory of Infectious Diseases, College of Veterinary Medicine, Jilin University, Changchun, 130062, China. yin@jlu.edu.cn.
Chan DingShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Shanghai, 200241, China. shoveldeen@shvri.ac.cn.
Shengqing YuShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Shanghai, 200241, China. yus@shvri.ac.cn.
Xiufan LiuAnimal Infectious Disease Laboratory, College of Veterinary Medicine, Yangzhou University, Yangzhou, Jiangsu, 225009, China. xfliu@yzu.edu.cn.
Chunfeng WangEngineering Research Center of Jilin Province for Animals Probiotics, College of Animal Science and Technology, Jilin Agricultural University, Changchun, 130118, China. wangchunfeng@jlau.edu.cn.
Zhuang DingLaboratory of Infectious Diseases, College of Veterinary Medicine, Jilin University, Changchun, 130062, China. dingzhuangjlu@126.com.
Jilin University · CNChinese Academy of Agricultural Sciences · CNJilin Agricultural University · CNShanghai Veterinary Research Institute · CNYangzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe virulent Newcastle disease virus (NDV) strain NA-1 (genotype VII) was isolated from an epizootic involving a flock of geese in Jilin Province, Northeast China, in 1999. Compared with the classical NDV strains, which have a genome size of 15,186 bp, the more recently isolated NDV strains, including that involved in the goose outbreak, have an extra six nucleotides in the 5'-untranslated region (UTR) of the nucleoprotein (NP) gene. This extra sequence, TCCCAC, is highly conserved and has been found in multiple NDV strains, including ZJ-1, WF00G, JSG0210, and NA-1. In the current study, an infectious clone from strain NA-1 was isolated and designated rNA-1. Subsequently, strain rNA-1 was mutated to delete the six-nucleotide insertion, producing strain rNA-1(-). Virulence of the recombinant virus was then assayed in chickens and geese.

resultsThe recombinant virus rNA-1(-) showed similar biological characteristics to the parental NA-1 strain in DF-1 chicken fibroblast cells. However, the virulence of rNA-1(-) in 9-day-old embryonated chicken eggs and 1-day-old specific pathogen-free (SPF) chickens was decreased compared with the rNA-1 control. Furthermore, the virulence of the recombinant strain was slightly decreased in 1-day-old SPF chickens when compared with that in 1-day-old geese.

conclusionFollowing deletion of six nucleotides in the 5'-UTR of the NP gene of NDV strain NA-1, the virulence of the rNA-1(-) recombinant strain was decreased in both chickens and geese. However, rNA-1(-) was more virulent in chickens than geese, as seen by the higher intracerebral pathogenicity index value.

Indexed as

Gene Deletion5' Untranslated RegionsAnimalsBlotting, WesternChickensCloning, MolecularGeeseNewcastle DiseaseNewcastle disease virusNucleoproteinsReal-Time Polymerase Chain ReactionVirulence5' Untranslated RegionsNucleoproteins

Identifiers

PMID25528581
PMCPMC4297397
OpenAlexW2019231740

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.