Evidence map›Paper›PMID 25527893›Full record

ArticleBMC medical genetics2014

Protective variant associated with alcohol dependence in a Mexican American cohort.

Trina M Norden-Krichmar, Ian R Gizer, Kirk C Wilhelmsen, Nicholas J Schork, Cindy L Ehlers

Open access · goldAbstract read
In one paragraph

Article in BMC medical genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Human genetics and epigenetics of alcohol use disorder.The Journal of clinical investigation · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Genetic Influences on Evening Preference Overlap with Those for Bipolar Disorder in a Sample of Mexican Americans and American Indians.Twin research and human genetics : the official journal of the International Society for Twin Studies · 2017
    Article
  10. Genome-Wide Association Study of Post-Traumatic Stress Disorder in Two High-Risk Populations.Twin research and human genetics : the official journal of the International Society for Twin Studies · 2017
    Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Trina M Norden-Krichmar
Ian R Gizer
Kirk C Wilhelmsen
Nicholas J Schork
Cindy L Ehlers
Scripps Research Institute · USJ. Craig Venter Institute · USUniversity of Missouri · USUniversity of North Carolina at Chapel Hill · US

Funding

Systems BiologyU19AG023122 · NIA · TRANSLATIONAL GENOMICS RESEARCH INST · PI PAOLA SEBASTIANI · 2004 to 2026
$102.6M
Viral Vector CoreP60AA006420 · NIAAA · SCRIPPS RESEARCH INSTITUTE, THE · PI MARISA ROBERTO · 2003 to 2026
$46.3M
Quantitative Biology CoreU19AI063603 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI YATES III, JOHN R · 2004 to 2015
$26.4M
Deep sequencing studies for cannabis and stimulant dependenceR01DA030976 · NIDA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI EHLERS, CINDY L, GELERNTER, JOEL · 2010 to 2014
$16.5M
SCRIPPS TRANSLATIONAL SCIENCE INSTITUTE (UL1)UL1RR025774 · NCRR · SCRIPPS RESEARCH INSTITUTE, THE · PI TOPOL, ERIC JEFFREY · 2008 to 2011
$16.3M
Substance Abuse & Behavioral Disinhibition: Integrating Genes & EnvironmentU01DA024417 · NIDA · UNIVERSITY OF MINNESOTA · PI IACONO, WILLIAM G. · 2007 to 2010
$10.8M
STATISTICS AND DATA MANAGEMENT COREP01AG027734 · NIA · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI BARZILAI, NIR J · 2007 to 2012
$9.3M
RISK FACTORS FOR ALCOHOLISM IN NATIVE AMERICANSR37AA010201 · NIAAA · SCRIPPS RESEARCH INSTITUTE, THE · PI EHLERS, CINDY L · 2007 to 2015
$7.0M
SYSTEMIC NEUROPHARMACOLOGYP50AA006420 · NIAAA · SCRIPPS RESEARCH INSTITUTE · PI KOOB, GEORGE F · 1985 to 2002
$5.1M
Genome Wide Association of Coronary Artery Disease and Related Risk FactorsR01HL089655 · NHLBI · MEDICAL COLLEGE OF WISCONSIN · PI BROECKEL, ULRICH · 2008 to 2012
$3.8M
RISK FACTORS FOR ALCOHOLISM IN NATIVE AMERICANSR01AA010201 · NIAAA · SCRIPPS RESEARCH INSTITUTE, THE · PI EHLERS, CINDY L · 1994 to 2006
$3.8M
Genomic Predictors of Combat Stress Vulnerability and ResilienceR01MH093500 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI NIEVERGELT, CAROLINE M · 2011 to 2013
$2.7M
NCRR NIH HHS 5 UL1RR025774NCRR NIH HHS UL1 RR025774NHLBI NIH HHS 5 R01 HL089655NHLBI NIH HHS R01 HL089655NIAAA NIH HHS 5R37 AA010201NIAAA NIH HHS AA006420NIAAA NIH HHS P50 AA006420NIAAA NIH HHS P60 AA006420NIAAA NIH HHS R01 AA010201NIAAA NIH HHS R37 AA010201NIAID NIH HHS 2 U19 AI063603NIAID NIH HHS R21 AI085374NIAID NIH HHS U19 AI063603NIA NIH HHS 2 U19AG023122NIA NIH HHS 5 P01 AG027734NIA NIH HHS 5 R01 AG035020NIA NIH HHS P01 AG027734NIA NIH HHS R01 AG035020NIA NIH HHS U19 AG023122NIDA NIH HHS 1 R21 DA033813NIDA NIH HHS 5 R01DA030976NIDA NIH HHS 5 U01 DA024417NIDA NIH HHS DA030976NIDA NIH HHS R01 DA030976NIDA NIH HHS R21 DA033813NIDA NIH HHS U01 DA024417NIMH NIH HHS 1 R01 MH093500NIMH NIH HHS R01 MH093500
6 · The paper itself

Abstract

backgroundMexican Americans, particularly those born in the United States, are at greater risk for alcohol associated morbidity and mortality. The present study sought to investigate whether specific genetic variants may be associated with alcohol use disorder phenotypes in a select population of Mexican American young adults.

methodsThe study evaluated a cohort of 427 (age 18 - 30 years) Mexican American men (n = 171) and women (n = 256). Information on alcohol dependence was obtained through interview using the Semi-Structured Assessment for the Genetics of Alcoholism (SSAGA). For all subjects, DNA was extracted from blood samples, followed by genotyping using an Affymetrix Axiom Exome1A chip.

resultsA protective variant (rs991316) located downstream from the ADH7 (alcohol dehydrogenase 7) gene showed suggestive significance in association with alcohol dependence symptom counts derived from DSM-III-R and DSM-IV criteria, as well as to clustered alcohol dependence symptoms. Additional linkage analysis suggested that nearby variants in linkage disequilibrium with rs991316 were not responsible for the observed association with the alcohol dependence phenotypes in this study.

conclusionsADH7 has been shown to have a protective role against alcohol dependence in previous studies involving other ethnicities, but has not been reported for Mexican Americans. These results suggest that variants near ADH7 may play a role in protection from alcohol dependence in this Mexican American cohort.

Indexed as

Genetic VariationAdolescentAdultAlcohol DehydrogenaseAlcoholismCohort StudiesDiagnostic and Statistical Manual of Mental DisordersFemaleGene FrequencyGenome-Wide Association StudyGenotypeGenotyping TechniquesHumansLinkage DisequilibriumMaleMexican AmericansADH7 protein, humanAlcohol Dehydrogenase

Identifiers

PMID25527893
PMCPMC4337107
OpenAlexW2119475317

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.