Evidence map›Paper›PMID 25527550›Full record

ArticleApplied and environmental microbiology2015

Integrative conjugative elements are widespread in field isolates of Mycoplasma species pathogenic for ruminants.

Florence Tardy, Virginie Mick, Emilie Dordet-Frisoni, Marc Serge Marenda, Pascal Sirand-Pugnet, Alain Blanchard, Christine Citti

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Review
  3. Integrative and conjugative elements inFrontiers in veterinary science · 2026
    Article
  4. Article
  5. Article
  6. Bacterial conjugation in the ruminant pathogenApplied and environmental microbiology · 2025
    Article
  7. Article
  8. Article
  9. Unraveling the adaptive strategies ofFrontiers in cellular and infection microbiology · 2024
    Article
  10. MinisculeSustainable microbiology · 2024
    Review
  11. Article
  12. Impacts ofMicrobial genomics · 2022
    Article
  13. Cell-in-Cell Phenomena in Wall-Less Bacteria: Is It Possible?International journal of molecular sciences · 2022
    Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Florence TardyAnses, Laboratoire de Lyon, UMR Mycoplasmoses des Ruminants, Lyon, France Université de Lyon, VetAgro Sup, UMR Mycoplasmoses des Ruminants, Marcy L'Etoile, France florence.tardy@anses.fr c.citti@envt.fr.
Virginie MickAnses, Laboratoire de Lyon, UMR Mycoplasmoses des Ruminants, Lyon, France Université de Lyon, VetAgro Sup, UMR Mycoplasmoses des Ruminants, Marcy L'Etoile, France.
Emilie Dordet-FrisoniINRA, UMR1225, IHAP, Toulouse, France Université de Toulouse, INP, ENVT, UMR1225, IHAP, Toulouse, France.
Marc Serge MarendaUniversity of Melbourne, Department of Veterinary Science, Werribee, Victoria, Australia.
Pascal Sirand-PugnetINRA UMR1332 Biologie du Fruit et Pathologie, Villenave d'Ornon, France Université de Bordeaux, UMR1332 Biologie du Fruit et Pathologie, Villenave d'Ornon, France.
Alain BlanchardINRA UMR1332 Biologie du Fruit et Pathologie, Villenave d'Ornon, France Université de Bordeaux, UMR1332 Biologie du Fruit et Pathologie, Villenave d'Ornon, France.
Christine CittiINRA, UMR1225, IHAP, Toulouse, France Université de Toulouse, INP, ENVT, UMR1225, IHAP, Toulouse, France florence.tardy@anses.fr c.citti@envt.fr.
Institut National de la Recherche Agronomique · MAPathophysiology, Diagnosis and Treatment of Bone Diseases · FRÉcole Nationale Vétérinaire de Toulouse · FRUniversity of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Comparative genomics have revealed massive horizontal gene transfer (HGT) between Mycoplasma species sharing common ruminant hosts. Further results pointed toward an integrative conjugative element (ICE) as an important contributor of HGT in the small-ruminant-pathogen Mycoplasma agalactiae. To estimate the prevalence of ICEs in ruminant mycoplasmas, we surveyed their occurrence in a collection of 166 field strains representing 4 (sub)species that are recognized as major pathogens. Based on available sequenced genomes, we first defined the conserved, minimal ICE backbone as composed of 4 coding sequences (CDSs) that are evenly distributed and predicted to be essential for ICE chromosomal integration-excision and horizontal transfer. Screening of the strain collection revealed that these 4 CDSs are well represented in ruminant Mycoplasma species, suggesting widespread occurrence of ICEs. Yet their prevalence varies within and among species, with no correlation found with the individual strain history. Extrachromosomal ICE forms were also often detected, suggesting that ICEs are able to circularize in all species, a first and essential step in ICE horizontal transfer. Examination of the junction of the circular forms and comparative sequence analysis of conserved CDSs clearly pointed toward two types of ICE, the hominis and spiroplasma types, most likely differing in their mechanism of excision-integration. Overall, our data indicate the occurrence and maintenance of functional ICEs in a large number of field isolates of ruminant mycoplasmas. These may contribute to genome plasticity and gene exchanges and, presumably, to the emergence of diverse genotypes within pathogenic mycoplasmas of veterinary importance.

Indexed as

Interspersed Repetitive SequencesRuminantsAnimalsConserved SequenceGene Transfer, HorizontalMycoplasmaMycoplasma InfectionsRecombination, Genetic

Identifiers

PMID25527550
PMCPMC4325163
OpenAlexW2065404831

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.