Evidence map›Paper›PMID 25527524›Full record

ArticleEukaryotic cell2015

SUMOylation is developmentally regulated and required for cell pairing during conjugation in Tetrahymena thermophila.

Amjad M Nasir, Qianyi Yang, Douglas L Chalker, James D Forney

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Amjad M NasirDepartment of Biochemistry, Purdue University, West Lafayette, Indiana, USA.
Qianyi YangDepartment of Biochemistry, Purdue University, West Lafayette, Indiana, USA.
Douglas L ChalkerDepartment of Biology, Washington University, St. Louis, Missouri, USA.ORCID http://orcid.org/0000-0002-0285-3344
James D ForneyDepartment of Biochemistry, Purdue University, West Lafayette, Indiana, USA forney@purdue.edu.
Purdue University West Lafayette · USWashington University in St. Louis · US

Funding

A RESOURCE CENTER FOR TETRAHYMENA THERMOPHILAP40RR019688 · NCRR · CORNELL UNIVERSITY ITHACA · PI CLARK, THEODORE G · 2005 to 2011
$2.3M
NCRR NIH HHS 2 P40 RR019688-05NCRR NIH HHS P40 RR019688NIGMS NIH HHS GM06593
6 · The paper itself

Abstract

The covalent attachment of small ubiquitin-like modifier (SUMO) to target proteins regulates numerous nuclear events in eukaryotes, including transcription, mitosis and meiosis, and DNA repair. Despite extensive interest in nuclear pathways within the field of ciliate molecular biology, there have been no investigations of the SUMO pathway in Tetrahymena. The developmental program of sexual reproduction of this organism includes cell pairing, micronuclear meiosis, and the formation of a new somatic macronucleus. We identified the Tetrahymena thermophila SMT3 (SUMO) and UBA2 (SUMO-activating enzyme) genes and demonstrated that the corresponding green fluorescent protein (GFP) tagged gene products are found predominantly in the somatic macronucleus during vegetative growth. Use of an anti-Smt3p antibody to perform immunoblot assays with whole-cell lysates during conjugation revealed a large increase in SUMOylation that peaked during formation of the new macronucleus. Immunofluorescence using the same antibody showed that the increase was localized primarily within the new macronucleus. To initiate functional analysis of the SUMO pathway, we created germ line knockout cell lines for both the SMT3 and UBA2 genes and found both are essential for cell viability. Conditional Smt3p and Uba2p cell lines were constructed by incorporation of the cadmium-inducible metallothionein promoter. Withdrawal of cadmium resulted in reduced cell growth and increased sensitivity to DNA-damaging agents. Interestingly, Smt3p and Uba2p conditional cell lines were unable to pair during sexual reproduction in the absence of cadmium, consistent with a function early in conjugation. Our studies are consistent with multiple roles for SUMOylation in Tetrahymena, including a dynamic regulation associated with the sexual life cycle.

Indexed as

SumoylationGene Expression Regulation, DevelopmentalLife Cycle StagesProtozoan ProteinsSUMO-1 ProteinTetrahymena thermophilaUbiquitin-Activating EnzymesProtozoan ProteinsSUMO-1 ProteinUbiquitin-Activating Enzymes

Identifiers

PMID25527524
PMCPMC4311922
OpenAlexW2155964898

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.