Evidence map›Paper›PMID 25526829›Full record

ArticleBMC medical genetics2014

Duplication 9p and their implication to phenotype.

Roberta Santos Guilherme, Vera Ayres Meloni, Ana Beatriz Alvarez Perez, Ana Luiza Pilla, Marco Antonio Paula de Ramos, Anelisa Gollo Dantas, Sylvia Satomi Takeno, Leslie Domenici Kulikowski, Maria Isabel Melaragno

Open access · goldAbstract read
In one paragraph

Article in BMC medical genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 80 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Roberta Santos GuilhermeDepartment of Morphology and Genetics, Universidade Federal de São Paulo, Rua Botucatu 740, CEP, 04023-900, São Paulo, Brazil. robertaguilherme@hotmail.com.
Vera Ayres MeloniDepartment of Morphology and Genetics, Universidade Federal de São Paulo, Rua Botucatu 740, CEP, 04023-900, São Paulo, Brazil. vera.meloni@gmail.com.
Ana Beatriz Alvarez PerezDepartment of Morphology and Genetics, Universidade Federal de São Paulo, Rua Botucatu 740, CEP, 04023-900, São Paulo, Brazil. bialvarez@uol.com.br.
Ana Luiza PillaDepartment of Morphology and Genetics, Universidade Federal de São Paulo, Rua Botucatu 740, CEP, 04023-900, São Paulo, Brazil. anapilla@uol.com.br.
Marco Antonio Paula de RamosDepartment of Morphology and Genetics, Universidade Federal de São Paulo, Rua Botucatu 740, CEP, 04023-900, São Paulo, Brazil. annamarco@uol.com.br.
Anelisa Gollo DantasDepartment of Morphology and Genetics, Universidade Federal de São Paulo, Rua Botucatu 740, CEP, 04023-900, São Paulo, Brazil. anegdantas@hotmail.com.
Sylvia Satomi TakenoDepartment of Morphology and Genetics, Universidade Federal de São Paulo, Rua Botucatu 740, CEP, 04023-900, São Paulo, Brazil. sylvinha66@yahoo.com.br.
Leslie Domenici KulikowskiDepartment of Pathology, Laboratório de Citogenômica, Universidade de São Paulo, Avenida Dr. Eneas Carvalho de Aguiar 647, CEP, 05403-000, São Paulo, Brazil. lesliekulik@gmail.com.
Maria Isabel MelaragnoDepartment of Morphology and Genetics, Universidade Federal de São Paulo, Rua Botucatu 740, CEP, 04023-900, São Paulo, Brazil. melaragno.maria@unifesp.br.
Universidade Federal de São Paulo · BRUniversidade de São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTrisomy 9p is one of the most common partial trisomies found in newborns. We report the clinical features and cytogenomic findings in five patients with different chromosome rearrangements resulting in complete 9p duplication, three of them involving 9p centromere alterations.

methodsThe rearrangements in the patients were characterized by G-banding, SNP-array and fluorescent in situ hybridization (FISH) with different probes.

resultsTwo patients presented de novo dicentric chromosomes: der(9;15)t(9;15)(p11.2;p13) and der(9;21)t(9;21)(p13.1;p13.1). One patient presented two concomitant rearranged chromosomes: a der(12)t(9;12)(q21.13;p13.33) and an psu i(9)(p10) which showed FISH centromeric signal smaller than in the normal chromosome 9. Besides the duplication 9p24.3p13.1, array revealed a 7.3 Mb deletion in 9q13q21.13 in this patient. The break in the psu i(9)(p10) probably occurred in the centromere resulting in a smaller centromere and with part of the 9q translocated to the distal 12p with the deletion 9q occurring during this rearrangement. Two patients, brother and sister, present 9p duplication concomitant to 18p deletion due to an inherited der(18)t(9;18)(p11.2;p11.31)mat.

conclusionsThe patients with trisomy 9p present a well-recognizable phenotype due to facial appearance, although the genotype-phenotype correlation can be difficult due to concomitant partial monosomy of other chromosomes. The chromosome 9 is rich in segmental duplication, especially in pericentromeric region, with high degree of sequence identity to sequences in 15p, 18p and 21p, chromosomes involved in our rearrangements. Thus, we suggest that chromosome 9 is prone to illegitimate recombination, either intrachromosomal or interchromosomal, which predisposes it to rearrangements, frequently involving pericentromeric regions.

Indexed as

AdolescentChildChromosomes, Human, Pair 9FemaleGenetic Association StudiesHumansIn Situ Hybridization, FluorescenceMaleOligonucleotide Array Sequence AnalysisPhenotypeRecombination, GeneticTranslocation, GeneticTrisomy

Identifiers

PMID25526829
PMCPMC4411943
OpenAlexW2143607967

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.