Evidence map›Paper›PMID 25526666›Full record

ArticleExperimental and molecular pathology2015

Levels of metacaspase1 and chaperones related to protein quality control in alcoholic and nonalcoholic steatohepatitis.

Alejandro S Mendoza, Jacques Dorce, Yue Peng, Barbara A French, Brittany Tillman, Jun Li, Samuel W French

Open access · greenAbstract read
In one paragraph

Article in Experimental and molecular pathology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Inflammatory status in human hepatic cirrhosis.World journal of gastroenterology · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Alejandro S MendozaLA Biomed, Department of Pathology, Harbor UCLA Medical Center, Torrance, CA, United States.
Jacques DorceLA Biomed, Department of Pathology, Harbor UCLA Medical Center, Torrance, CA, United States.
Yue PengLA Biomed, Department of Pathology, Harbor UCLA Medical Center, Torrance, CA, United States.
Barbara A FrenchLA Biomed, Department of Pathology, Harbor UCLA Medical Center, Torrance, CA, United States.
Brittany TillmanLA Biomed, Department of Pathology, Harbor UCLA Medical Center, Torrance, CA, United States.
Jun LiLA Biomed, Department of Pathology, Harbor UCLA Medical Center, Torrance, CA, United States.
Samuel W FrenchLA Biomed, Department of Pathology, Harbor UCLA Medical Center, Torrance, CA, United States.
UCLA Medical Center · US

Funding

ALCOHOLIC HEPATITIS PATHOGENESIS AS DETERMINED FROM HUMAN LIVER TISSUE ANALYSISU01AA021898 · NIAAA · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI FRENCH, SAMUEL WILLIAM · 2013 to 2017
$1.0M
NIAAA NIH HHS U01 AA021898PHS HHS U01-021898-02
6 · The paper itself

Abstract

Efficient management of misfolded or aggregated proteins in ASH and NASH is crucial for continued hepatic viability. Cellular protein quality control systems play an important role in the pathogenesis and progression of ASH and NASH. In a recent study, elevated Mca1 expression counteracted aggregation and accumulation of misfolded proteins and extended the life span of the yeast Saccharomyces cerevisiae (Hill et al, 2014). Mca1 may also associate with Ssa1 and Hsp104 in disaggregation and fragmentation of aggregated proteins and their subsequent degradation through the ER-associated degradation (ERAD) pathway. If degradation is not available, protection of the cellular environment from a misfolded protein is accomplished by its sequestration into two distinct inclusion bodies (Kaganovich et al., 2008) called the JUNQ (JUxta Nuclear Quality control compartment) and the IPOD (Insoluble Protein Deposit). Mca1, Hsp104, Hsp40, Ydj1, Ssa1, VCP/p97, and p62 all play important roles in protein quality control systems. This study aims to measure the expression of Mca1 and related chaperones involved in protein quality control in alcoholic steatohepatitis (ASH), and nonalcoholic steatohepatitis (NASH) compared with normal control liver biopsies. Mca1, Hsp104, Hsp40, Ydj1, Ssa1, VCP/p97, and p62 expressions were measured in three to six formalin-fixed paraffin embedded ASH and NASH liver biopsies and control normal liver specimens by immunofluorescence staining and quantified by immunofluorescence intensity. Mca1, Hsp104, Ydj1 and p62 were significantly upregulated compared to control (p<0.05) in ASH specimens. Hsp40 and VCP/p97 were also uptrending in ASH. In NASH, the only significant difference was the increased expression of Hsp104 compared to control (p<0.05). Ssa1 levels were uptrending in both ASH and NASH specimens. The upregulation of Mca1, Hsp104, Ydj1 and p62 in ASH may be elicited as a response to the chronic exposure of the hepatocytes to the toxicity of alcohol. Recruitment of Mca1, Hsp104, Ydj1 and p62 may indicate that autophagy, the ERAD, JUNQ, and IPOD systems are active in ASH. Whereas in NASH, elevated Hsp104 and uptrending Ssa1 levels may indicate that autophagy and IPOD may be the only active protein quality control systems involved.

Indexed as

Gene Expression RegulationAutophagyBiomarkersCaspasesEndoplasmic Reticulum-Associated DegradationFatty Liver, AlcoholicFluorescent Antibody TechniqueHumansLiverMolecular ChaperonesNon-alcoholic Fatty Liver DiseaseProtein FoldingProteolysisBiomarkersCaspasesMolecular ChaperonesAlcoholic steatohepatitisERADHsp104Hsp40IPODJUNQMca1Nonalcoholic steatohepatitisp62Protein quality controlSsa1VCP/p97Ydj1

Identifiers

PMID25526666
PMCPMC4363275
OpenAlexW2004592256

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.