Evidence map›Paper›PMID 25525749›Full record

ArticleeLife2014

Transcriptional profiling at whole population and single cell levels reveals somatosensory neuron molecular diversity.

Isaac M Chiu, Lee B Barrett, Erika K Williams, David E Strochlic, Seungkyu Lee, Andy D Weyer, Shan Lou, Gregory S Bryman, David P Roberson, Nader Ghasemlou and 8 more

Erratum issuedAbstract read
In one paragraph

Article in eLife, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 157 papers.

0numbers the graph read from it
0cells of the map it votes in
157citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

157 citing papers in PubMed.

  1. Article
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  6. Maladaptive immunity to the microbiota promotes neuronal hyperinnervation and itch via IL-17A.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  9. Neuro-immune cross-talk in cancer.Nature reviews. Cancer · 2025
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  11. NaResearch (Washington, D.C.) · 2025
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  12. Sensory nerve-secreted factors regulate basal keratinocyte functionIntegrative organismal biology (Oxford, England) · 2025
    Article
  13. Renal interoception in health and disease.Autonomic neuroscience : basic & clinical · 2024
    Review
  14. Article
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  16. Neuroimmune Interactions in the Intestine.Annual review of immunology · 2024
    Review
  17. Article
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  19. Peripheral Nervous System (PNS) Myelin Diseases.Cold Spring Harbor perspectives in biology · 2024
    Review
  20. Article

97 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors.

Isaac M ChiuF.M. Kirby Neurobiology Center, Boston Children's Hospital, Boston, United States.
Lee B BarrettF.M. Kirby Neurobiology Center, Boston Children's Hospital, Boston, United States.
Erika K WilliamsDepartment of Cell Biology, Harvard Medical School, Boston, United States.
David E StrochlicDepartment of Cell Biology, Harvard Medical School, Boston, United States.
Seungkyu LeeF.M. Kirby Neurobiology Center, Boston Children's Hospital, Boston, United States.
Andy D WeyerDepartment of Cell Biology, Neurobiology and Anatomy, Medical College of Wisconsin, Milwaukee, United States.
Shan LouDana-Farber Cancer Institute, Harvard Medical School, Boston, United States.
Gregory S BrymanF.M. Kirby Neurobiology Center, Boston Children's Hospital, Boston, United States.
David P RobersonF.M. Kirby Neurobiology Center, Boston Children's Hospital, Boston, United States.
Nader GhasemlouF.M. Kirby Neurobiology Center, Boston Children's Hospital, Boston, United States.
Cara PiccoliF.M. Kirby Neurobiology Center, Boston Children's Hospital, Boston, United States.
Ezgi AhatF.M. Kirby Neurobiology Center, Boston Children's Hospital, Boston, United States.
Victor WangF.M. Kirby Neurobiology Center, Boston Children's Hospital, Boston, United States.
Enrique J CobosF.M. Kirby Neurobiology Center, Boston Children's Hospital, Boston, United States.
Cheryl L StuckyDepartment of Cell Biology, Neurobiology and Anatomy, Medical College of Wisconsin, Milwaukee, United States.
Qiufu MaDana-Farber Cancer Institute, Harvard Medical School, Boston, United States.
Stephen D LiberlesDepartment of Cell Biology, Harvard Medical School, Boston, United States.
Clifford J WoolfF.M. Kirby Neurobiology Center, Boston Children's Hospital, Boston, United States.

Funding

Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
SYNAPTIC MECHANISMS IN HIPPOCAMPAL EPILEPTOGENESISP30HD018655 · NICHD · CHILDREN'S HOSPITAL BOSTON · PI POMEROY, SCOTT LOREN · 1985 to 2015
$26.2M
Nociceptive Mechanisms Underlying Sickle Cell PainR01NS070711 · NINDS · MEDICAL COLLEGE OF WISCONSIN · PI Bonnie N Dittel, Cheryl Louise Stucky · 2009 to 2026
$8.7M
ALTERED SENSIBILITY FOLLOWING PERIPHERAL NERVE DAMAGER01NS038253 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI WOOLF, CLIFFORD J · 1999 to 2017
$8.2M
TRP Channel Mediated Pain CircuitryP01NS072040 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI CLAPHAM, DAVID E. · 2011 to 2015
$6.7M
Progenitor Cells inHuman Skeletal MuscleP50NS040828 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI KUNKEL, LOUIS M · 2008 to 2011
$5.9M
Neural Plasticity and Inflammatory PainR37NS039518 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI WOOLF, CLIFFORD J · 2011 to 2017
$4.7M
Genetic Control of Nociceptive Sensory Neuron Development and Pain BehaviorR01DE018025 · NIDCR · DANA-FARBER CANCER INST · PI MA, QIUFU · 2007 to 2016
$4.0M
The role of nociceptor neurons in bacterial host defense and inflammationK22AI114810 · NIAID · HARVARD MEDICAL SCHOOL · PI CHIU, ISAAC MING-CHENG · 2015 to 2016
$270k
The Role of Direct Pathogen Detection by Sensory Neurons in Combating Bacterial IF32NS076297 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI CHIU, ISAAC MING-CHENG · 2011 to 2012
$105k
NIAID NIH HHS K22 AI114810NICHD NIH HHS P30 HD018655NIDCR NIH HHS R01 DE018025NIGMS NIH HHS T32 GM007753NINDS NIH HHS 1P01 NS072040-01NINDS NIH HHS F32 NS076297NINDS NIH HHS P01 NS072040NINDS NIH HHS P50 NS040828NINDS NIH HHS R01 NS038253NINDS NIH HHS R01 NS070711NINDS NIH HHS R37 NS039518
6 · The paper itself

Abstract

The somatosensory nervous system is critical for the organism's ability to respond to mechanical, thermal, and nociceptive stimuli. Somatosensory neurons are functionally and anatomically diverse but their molecular profiles are not well-defined. Here, we used transcriptional profiling to analyze the detailed molecular signatures of dorsal root ganglion (DRG) sensory neurons. We used two mouse reporter lines and surface IB4 labeling to purify three major non-overlapping classes of neurons: 1) IB4(+)SNS-Cre/TdTomato(+), 2) IB4(-)SNS-Cre/TdTomato(+), and 3) Parv-Cre/TdTomato(+) cells, encompassing the majority of nociceptive, pruriceptive, and proprioceptive neurons. These neurons displayed distinct expression patterns of ion channels, transcription factors, and GPCRs. Highly parallel qRT-PCR analysis of 334 single neurons selected by membership of the three populations demonstrated further diversity, with unbiased clustering analysis identifying six distinct subgroups. These data significantly increase our knowledge of the molecular identities of known DRG populations and uncover potentially novel subsets, revealing the complexity and diversity of those neurons underlying somatosensation.

Indexed as

Gene Expression ProfilingTranscription, GeneticAnimalsCell SeparationCluster AnalysisFlow CytometryGanglia, SpinalMicePatch-Clamp TechniquesPrincipal Component AnalysisSensory Receptor CellsDRGevolutionary biologygenomicsmouseneurosciencenociceptionperipheral nervous systemproprioceptionsomatosensationtranscriptome

Identifiers

PMID25525749
PMCPMC4383053

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.