Evidence map›Paper›PMID 25524988›Full record

ArticleThe Journal of experimental biology2015

Opsins in Limulus eyes: characterization of three visible light-sensitive opsins unique to and co-expressed in median eye photoreceptors and a peropsin/RGR that is expressed in all eyes.

Barbara-Anne Battelle, Karen E Kempler, Spencer R Saraf, Catherine E Marten, Donald R Dugger, Daniel I Speiser, Todd H Oakley

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. The nervous and visual systems of onychophorans and tardigrades: learning about arthropod evolution from their closest relatives.Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2017
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Barbara-Anne BattelleWhitney Laboratory for Marine Bioscience and Departments of Neuroscience and Biology, 9505 Ocean Shore Blvd, University of Florida, St Augustine, FL 32080, USA Battelle@whitney.ufl.edu.
Karen E KemplerWhitney Laboratory for Marine Bioscience and Departments of Neuroscience and Biology, 9505 Ocean Shore Blvd, University of Florida, St Augustine, FL 32080, USA.
Spencer R SarafWhitney Laboratory for Marine Bioscience and Departments of Neuroscience and Biology, 9505 Ocean Shore Blvd, University of Florida, St Augustine, FL 32080, USA.
Catherine E MartenWhitney Laboratory for Marine Bioscience and Departments of Neuroscience and Biology, 9505 Ocean Shore Blvd, University of Florida, St Augustine, FL 32080, USA.
Donald R DuggerDepartment of Ophthalmology, University of Florida, Gainesville, FL 32080, USA.
Daniel I SpeiserDepartment of Ecology, Evolution and Marine Biology, University of California, Santa Barbara, CA 93106, USA Department of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.
Todd H OakleyDepartment of Ecology, Evolution and Marine Biology, University of California, Santa Barbara, CA 93106, USA.
University of Florida · USUniversity of California, Santa Barbara · USWhitney Museum of American Art · US

Funding

Large Scale Genome SequencingU54HG003079 · NHGRI · WASHINGTON UNIVERSITY · PI DUTCHER, SUSAN K · 2004 to 2016
$445.7M
Vision Research CoreP30EY021721 · NEI · UNIVERSITY OF FLORIDA · PI HAUSWIRTH, WILLIAM W · 2011 to 2015
$2.8M
NEI NIH HHS P30 EY021721NHGRI NIH HHS U54 HG003079
6 · The paper itself

Abstract

The eyes of the horseshoe crab Limulus polyphemus have long been used for studies of basic mechanisms of vision, and the structure and physiology of Limulus photoreceptors have been examined in detail. Less is known about the opsins Limulus photoreceptors express. We previously characterized a UV opsin (LpUVOps1) that is expressed in all three types of Limulus eyes (lateral compound eyes, median ocelli and larval eyes) and three visible light-sensitive rhabdomeric opsins (LpOps1, -2 and -5) that are expressed in Limulus lateral compound and larval eyes. Physiological studies showed that visible light-sensitive photoreceptors are also present in median ocelli, but the visible light-sensitive opsins they express were unknown. In the current study we characterize three newly identified, visible light-sensitive rhabdomeric opsins (LpOps6, -7 and -8) that are expressed in median ocelli. We show that they are ocellar specific and that all three are co-expressed in photoreceptors distinct from those expressing LpUVOps1. Our current findings show that the pattern of opsin expression in Limulus eyes is much more complex than previously thought and extend our previous observations of opsin co-expression in visible light-sensitive Limulus photoreceptors. We also characterize a Limulus peropsin/RGR (LpPerOps1). We examine the phylogenetic relationship of LpPerOps1 with other peropsins and RGRs, demonstrate that LpPerOps1 transcripts are expressed in each of the three types of Limulus eyes and show that the encoded protein is expressed in membranes of cells closely associated with photoreceptors in each eye type. These finding suggest that peropsin was in the opsin repertoire of euchelicerates.

Indexed as

LightAnimalsCell MembraneCompound Eye, ArthropodHorseshoe CrabsOpsinsPhotoreceptor Cells, InvertebratePhylogenyOpsinsLimulus photoreceptorOcellar specific opsinOpsin co-expressionPeropsin

Identifiers

PMID25524988
PMCPMC4317242
OpenAlexW2151513086

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.