Evidence map›Paper›PMID 25524236›Full record

ArticleBMC plant biology2014

Regulation of Zn and Fe transporters by the GPC1 gene during early wheat monocarpic senescence.

Stephen Pearce, Facundo Tabbita, Dario Cantu, Vince Buffalo, Raz Avni, Hans Vazquez-Gross, Rongrong Zhao, Christopher J Conley, Assaf Distelfeld, Jorge Dubcovksy

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
11.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 139 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Stephen Pearce
Facundo Tabbita
Dario Cantu
Vince Buffalo
Raz Avni
Hans Vazquez-Gross
Rongrong Zhao
Christopher J Conley
Assaf Distelfeld
Jorge Dubcovksy
University of California, Davis · USTel Aviv University · ILChina Agricultural University · CNConsejo Nacional de Investigaciones Científicas y Técnicas · ARGordon and Betty Moore Foundation · US

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

backgroundDuring wheat senescence, leaf components are degraded in a coordinated manner, releasing amino acids and micronutrients which are subsequently transported to the developing grain. We have previously shown that the simultaneous downregulation of Grain Protein Content (GPC) transcription factors, GPC1 and GPC2, greatly delays senescence and disrupts nutrient remobilization, and therefore provide a valuable entry point to identify genes involved in micronutrient transport to the wheat grain.

resultsWe generated loss-of-function mutations for GPC1 and GPC2 in tetraploid wheat and showed in field trials that gpc1 mutants exhibit significant delays in senescence and reductions in grain Zn and Fe content, but that mutations in GPC2 had no significant effect on these traits. An RNA-seq study of these mutants at different time points showed a larger proportion of senescence-regulated genes among the GPC1 (64%) than among the GPC2 (37%) regulated genes. Combined, the two GPC genes regulate a subset (21.2%) of the senescence-regulated genes, 76.1% of which are upregulated at 12 days after anthesis, before the appearance of any visible signs of senescence. Taken together, these results demonstrate that GPC1 is a key regulator of nutrient remobilization which acts predominantly during the early stages of senescence. Genes upregulated at this stage include transporters from the ZIP and YSL gene families, which facilitate Zn and Fe export from the cytoplasm to the phloem, and genes involved in the biosynthesis of chelators that facilitate the phloem-based transport of these nutrients to the grains.

conclusionsThis study provides an overview of the transport mechanisms activated in the wheat flag leaf during monocarpic senescence. It also identifies promising targets to improve nutrient remobilization to the wheat grain, which can help mitigate Zn and Fe deficiencies that afflict many regions of the developing world.

Indexed as

Gene Expression Regulation, DevelopmentalGene Expression Regulation, PlantBase SequenceIronMembrane Transport ProteinsMolecular Sequence DataPhylogenyPlant LeavesPlant ProteinsRNA, PlantTriticumZincIronMembrane Transport ProteinsPlant ProteinsRNA, PlantZinc

Identifiers

PMID25524236
PMCPMC4302714
OpenAlexW2168920506

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.