Evidence map›Paper›PMID 25523762›Full record

ArticleGenome announcements2014

Comparative Genome Analysis of Two Isolates of the Fish Pathogen Piscirickettsia salmonis from Different Hosts Reveals Major Differences in Virulence-Associated Secretion Systems.

Harry Bohle, Patricio Henríquez, Horst Grothusen, Esteban Navas, Alvaro Sandoval, Fernando Bustamante, Patricio Bustos, Marcos Mancilla

Open access · diamondAbstract read
In one paragraph

Article in Genome announcements, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Co-Infection by LF-89-Like and EM-90-Like Genogroups ofPathogens (Basel, Switzerland) · 2023
    Article
  5. Cohabitation ofFrontiers in cellular and infection microbiology · 2023
    Article
  6. Article
  7. Review
  8. Why DoesFrontiers in immunology · 2022
    Review
  9. Complete Lipopolysaccharide ofFrontiers in cellular and infection microbiology · 2022
    Article
  10. Why vaccines fail againstFrontiers in immunology · 2022
    Review
  11. Article
  12. PCR-RFLP Detection and Genogroup Identification ofPathogens (Basel, Switzerland) · 2020
    Article
  13. Transcriptomic Changes ofFrontiers in cellular and infection microbiology · 2019
    Article
  14. Article
  15. Analysis ofFrontiers in microbiology · 2017
    Article
  16. Comparative Pan-Genome Analysis ofFrontiers in cellular and infection microbiology · 2017
    Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Harry BohleLaboratorio de Diagnóstico y Biotecnología, ADL Diagnostic Chile Ltda., Puerto Montt, Chile.
Patricio HenríquezLaboratorio de Diagnóstico y Biotecnología, ADL Diagnostic Chile Ltda., Puerto Montt, Chile.
Horst GrothusenLaboratorio de Diagnóstico y Biotecnología, ADL Diagnostic Chile Ltda., Puerto Montt, Chile.
Esteban NavasLaboratorio de Diagnóstico y Biotecnología, ADL Diagnostic Chile Ltda., Puerto Montt, Chile.
Alvaro SandovalLaboratorio de Diagnóstico y Biotecnología, ADL Diagnostic Chile Ltda., Puerto Montt, Chile.
Fernando BustamanteLaboratorio de Diagnóstico y Biotecnología, ADL Diagnostic Chile Ltda., Puerto Montt, Chile.
Patricio BustosLaboratorio de Diagnóstico y Biotecnología, ADL Diagnostic Chile Ltda., Puerto Montt, Chile.
Marcos MancillaLaboratorio de Diagnóstico y Biotecnología, ADL Diagnostic Chile Ltda., Puerto Montt, Chile mmancilla@adldiagnostic.cl.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Outbreaks caused by Piscirickettsia salmonis are one of the major threats to the sustainability of the Chilean salmon industry. We report here the annotated draft genomes of two P. salmonis isolates recovered from different salmonid species. A comparative analysis showed that the number of virulence-associated secretion systems constitutes a main genomic difference.

Identifiers

PMID25523762
PMCPMC4271152
OpenAlexW2142153371

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.