Evidence map›Paper›PMID 25522925›Full record

ArticleJournal of peptide science : an official publication of the European Peptide Society2015

Small-molecule inhibitors of JC polyomavirus infection.

Achani Yatawara, Gabriel Gaidos, Chamila N Rupasinghe, Bethany A O'Hara, Maria Pellegrini, Walter J Atwood, Dale F Mierke

Open access · bronzeAbstract read
In one paragraph

Article in Journal of peptide science : an official publication of the European Peptide Society, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Achani YatawaraDepartment of Chemistry, Dartmouth College, Hanover, NH, 03755, USA.
Gabriel Gaidos
Chamila N Rupasinghe
Bethany A O'Hara
Maria Pellegrini
Walter J Atwood
Dale F Mierke
Dartmouth College · USBrown University · US

Funding

Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Steven D Leach · 1985 to 2026
$91.3M
SYNTHETIC CHEMISTRY COREP01NS065719 · NINDS · BROWN UNIVERSITY · PI ATWOOD, WALTER J · 2009 to 2018
$12.3M
Center for Cancer Signaling NetworksP30GM103410 · NIGMS · BROWN UNIVERSITY · PI ATWOOD, WALTER J · 2012 to 2015
$4.3M
NCI NIH HHS P30 CA023108NIGMS NIH HHS P30 GM 103410NIGMS NIH HHS P30 GM103410NINDS NIH HHS P01 NS 065719NINDS NIH HHS P01 NS065719
6 · The paper itself

Abstract

The JC polyomavirus (JCPyV) infects approximately 50% of the human population. In healthy individuals, the infection remains dormant and asymptomatic, but in immuno-suppressed patients, it can cause progressive multifocal leukoencephalopathy (PML), a potentially fatal demyelinating disease. Currently, there are no drugs against JCPyV infection nor for the treatment of PML. Here, we report the development of small-molecule inhibitors of JCPyV that target the initial interaction between the virus and host cell and thereby block viral entry. Utilizing a combination of computational and NMR-based screening techniques, we target the LSTc tetrasaccharide binding site within the VP1 pentameric coat protein of JCPyV. Four of the compounds from the screen effectively block viral infection in our in vitro assays using SVG-A cells. For the most potent compound, we used saturation transfer difference NMR to determine the mode of binding to purified pentamers of JCPyV VP1. Collectively, these results demonstrate the viability of this class of compounds for eventual development of JCPyV-antiviral therapeutics.

Indexed as

AnimalsAntiviral AgentsBinding SitesBiological AssayCapsid ProteinsCell Line, TransformedChlorocebus aethiopsCOS CellsEscherichia coliGene ExpressionHEK293 CellsHumansJC VirusMolecular Docking SimulationNeurogliaProtein BindingAntiviral AgentsCapsid ProteinsRecombinant ProteinsSmall Molecule LibrariesVP1 protein, polyomaviruspolyomavirusprogressive multifocal leukoencephalopathysaturation transfer difference NMRsmall molecular screening

Identifiers

PMID25522925
PMCPMC4478595
OpenAlexW1488236158

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.