Evidence map›Paper›PMID 25522736›Full record

ArticleBMC plant biology2014

Microbe-associated molecular pattern-induced calcium signaling requires the receptor-like cytoplasmic kinases, PBL1 and BIK1.

Stefanie Ranf, Lennart Eschen-Lippold, Katja Fröhlich, Lore Westphal, Dierk Scheel, Justin Lee

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
13.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 130 citations in OpenAlex.

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2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Stefanie RanfStress and Developmental Biology, Leibniz Institute of Plant Biochemistry, Weinberg 3, Halle/Saale, D-06120, Germany. ranf@wzw.tum.de.
Lennart Eschen-LippoldStress and Developmental Biology, Leibniz Institute of Plant Biochemistry, Weinberg 3, Halle/Saale, D-06120, Germany. leschen@ipb-halle.de.
Katja FröhlichStress and Developmental Biology, Leibniz Institute of Plant Biochemistry, Weinberg 3, Halle/Saale, D-06120, Germany. Katja.Froehlich@gmx.de.
Lore WestphalStress and Developmental Biology, Leibniz Institute of Plant Biochemistry, Weinberg 3, Halle/Saale, D-06120, Germany. Lore.Westphal@ipb-halle.de.
Dierk ScheelStress and Developmental Biology, Leibniz Institute of Plant Biochemistry, Weinberg 3, Halle/Saale, D-06120, Germany. dscheel@ipb-halle.de.
Justin LeeStress and Developmental Biology, Leibniz Institute of Plant Biochemistry, Weinberg 3, Halle/Saale, D-06120, Germany. jlee@ipb-halle.de.
Leibniz Association · DETechnical University of Munich · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPlant perception of conserved microbe-derived or damage-derived molecules (so-called microbe- or damage-associated molecular patterns, MAMPs or DAMPs, respectively) triggers cellular signaling cascades to initiate counteracting defence responses. Using MAMP-induced rise in cellular calcium levels as one of the earliest biochemical readouts, we initiated a genetic screen for components involved in early MAMP signaling in Arabidopsis thaliana.

resultsWe characterized here the "changed calcium elevation 5" (cce5) mutant, where five allelic cce5 mutants were isolated. They all show reduced calcium levels after elicitation with peptides representing bacteria-derived MAMPs (flg22 and elf18) and endogenous DAMP (AtPep1), but a normal response to chitin octamers. Mapping, sequencing of the mutated locus and complementation studies revealed CCE5 to encode the receptor-like cytoplasmic kinase (RLCK), avrPphB sensitive 1-like 1 (PBL1). Kinase activities of PBL1 derived from three of the cce5 alleles are abrogated in vivo. Validation with T-DNA mutants revealed that, besides PBL1, another RLCK, Botrytis-induced kinase 1 (BIK1), is also required for MAMP/DAMP-induced calcium elevations.

conclusionsHence, PBL1 and BIK1 (but not two related RLCKs, PBS1 and PBL2) are required for MAMP/DAMP-induced calcium signaling. It remains to be investigated if the many other RLCKs encoded in the Arabidopsis genome affect early calcium signal transduction - perhaps in dependence on the type of MAMP/DAMP ligands. A future challenge would be to identify the substrates of these various RLCKs, in order to elucidate their signaling role between the receptor complexes at the plasma membrane and downstream cellular signaling components.

Indexed as

ArabidopsisArabidopsis ProteinsBacterial ProteinsCalcium SignalingProtein KinasesProtein Serine-Threonine KinasesArabidopsis ProteinsavrPphB protein, Pseudomonas syringaeBacterial ProteinsBAK1 protein, ArabidopsisBIK1 protein, ArabidopsisPBL1 protein, ArabidopsisProtein KinasesProtein Serine-Threonine Kinases

Identifiers

PMID25522736
PMCPMC4279983
OpenAlexW2096865820

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.