Evidence map›Paper›PMID 25522230›Full record

ArticlePLoS neglected tropical diseases2014

Rapid and sensitive detection of Bartonella bacilliformis in experimentally infected sand flies by loop-mediated isothermal amplification (LAMP) of the Pap31 gene.

Nasikarn Angkasekwinai, Erin H Atkins, Richard N Johnson, John P Grieco, Wei Mei Ching, Chien Chung Chao

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Carrion's Disease: the Sound of Silence.Clinical microbiology reviews · 2018
    Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Nasikarn AngkasekwinaiUniformed Services University of the Health Sciences, Bethesda, Maryland, United States of America; Naval Medical Research Center, Silver Spring, Maryland, United States of America; Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand.
Erin H AtkinsUniformed Services University of the Health Sciences, Bethesda, Maryland, United States of America; Naval Medical Research Center, Silver Spring, Maryland, United States of America.
Richard N JohnsonUniformed Services University of the Health Sciences, Bethesda, Maryland, United States of America.
John P GriecoUniformed Services University of the Health Sciences, Bethesda, Maryland, United States of America.
Wei Mei ChingUniformed Services University of the Health Sciences, Bethesda, Maryland, United States of America; Naval Medical Research Center, Silver Spring, Maryland, United States of America.
Chien Chung ChaoUniformed Services University of the Health Sciences, Bethesda, Maryland, United States of America; Naval Medical Research Center, Silver Spring, Maryland, United States of America.
Uniformed Services University of the Health Sciences · USNaval Medical Research Command · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCarrion' disease, caused by Bartonella bacilliformis, remains truly neglected due to its focal geographical nature. A wide spectrum of clinical manifestations, including asymptomatic bacteremia, and lack of a sensitive diagnostic test can potentially lead to a spread of the disease into non-endemic regions where competent sand fly vectors may be present. A reliable test capable of detecting B. bacilliformis is urgently needed. Our objective is to develop a loop-mediated isothermal amplification (LAMP) assay targeting the pap31 gene to detect B. bacilliformis. METHODS AND

findingsThe sensitivity of the LAMP was evaluated in comparison to qPCR using plasmid DNA containing the target gene and genomic DNA in the absence and presence of human or sand fly DNA. The detection limit of LAMP was 1 to 10 copies/µL, depending on the sample metrics. No cross-reaction was observed when testing against a panel of various closely related bacteria. The utility of the LAMP was further compared to qPCR by the examination of 74 Lutzomyia longipalpis sand flies artificially fed on blood spiked with B. bacilliformis and harvested at days (D) 1, 3, 5, 7 and 9 post feeding. Only 86% of sand flies at D1 and 63% of flies at D3 were positive by qPCR. LAMP was able to detect B. bacilliformis in all those flies confirmed positive by qPCR. However, none of the flies after D3 were positive by either LAMP or qPCR. In addition to demonstrating the sensitivity of the LAMP assay, these results suggest that B. bacilliformis cannot propagate in artificially fed L. longipalpis.

conclusionsThe LAMP assay is as sensitive as qPCR for the detection of B. bacilliformis and could be useful to support diagnosis of patients in low-resource settings and also to identify B. bacilliformis in the sand fly vector.

Indexed as

AnimalsBartonella bacilliformisBartonella InfectionsDNA, BacterialFemaleInsect VectorsNucleic Acid Amplification TechniquesPsychodidaeSensitivity and SpecificityDNA, Bacterial

Identifiers

PMID25522230
PMCPMC4270493
OpenAlexW2037728743

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.