Evidence map›Paper›PMID 25521354›Full record

ArticlePharmacogenomics2014

Detection of an endogenous urinary biomarker associated with CYP2D6 activity using global metabolomics.

Jessica Tay-Sontheimer, Laura M Shireman, Richard P Beyer, Taurence Senn, Daniela Witten, Robin E Pearce, Andrea Gaedigk, Cletus L Gana Fomban, Justin D Lutz, Nina Isoherranen and 4 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Pharmacogenomics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Rudolf Buchheim Award 2026: solanidine as a dietary derived CYP2D6 biomarker.Naunyn-Schmiedeberg's archives of pharmacology · 2026
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Recent advances in the ontogeny of drug disposition.British journal of clinical pharmacology · 2022
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. The reproducibility of urinary ions in manganese exposed workers.Journal of trace elements in medicine and biology : organ of the Society for Minerals and Trace Elements (GMS) · 2019
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Jessica Tay-SontheimerDepartment of Pharmaceutics, University of Washington, Seattle, WA, USA.
Laura M Shireman
Richard P Beyer
Taurence Senn
Daniela Witten
Robin E Pearce
Andrea Gaedigk
Cletus L Gana Fomban
Justin D Lutz
Nina Isoherranen
Kenneth E Thummel
Oliver Fiehn
J Steven Leeder
Yvonne S Lin
University of Washington · USChildren's Mercy Hospital · USUniversity of California, Davis · USUniversity of Missouri–Kansas City · US

Funding

Institute of Translational Health SciencesUL1TR000423 · NCATS · UNIVERSITY OF WASHINGTON · PI DISIS, MARY L. · 2012 to 2016
$49.4M
XENOBIOTIC BIOTRANSFORMATION AND DISPOSITIONP30ES007033 · NIEHS · UNIVERSITY OF WASHINGTON · PI ALI SHOJAIE · 1995 to 2026
$42.5M
NCCIH Supplement to NCATS/CTSA Program for KL2 Scholars - M. SoddersKL2TR002317 · NCATS · UNIVERSITY OF WASHINGTON · PI Christy Michelle McKinney · 2017 to 2026
$14.5M
Heartland Institute for Clinical and Translational ResearchUL1TR000001 · NCATS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI BAROHN, RICHARD J. · 2012 to 2015
$13.0M
Pharmacological Sciences SupplementT32GM007750 · NIGMS · UNIVERSITY OF WASHINGTON · PI ATKINS, WILLIAM M · 1985 to 2023
$12.6M
Institute of Translational Health SciencesKL2TR000421 · NCATS · UNIVERSITY OF WASHINGTON · PI DISIS, MARY L. · 2012 to 2016
$12.6M
HEARTLAND INSTITUTE FOR CLINICAL AND TRANSLATIONAL RESEARCHUL1RR033179 · NCRR · UNIVERSITY OF KANSAS MEDICAL CENTER · PI BAROHN, RICHARD J. · 2011 to 2011
$3.2M
Exogenous and Endogenous Biomarkers of CYP2D6 Variability in PediatricsR01HD058556 · NICHD · CHILDREN'S MERCY HOSP (KANSAS CITY, MO) · PI LEEDER, JAMES STEVEN, LIN, YVONNE SARAH · 2010 to 2014
$2.7M
NCATS NIH HHS KL2 TR000421NCATS NIH HHS KL2 TR002317NCATS NIH HHS UL1 TR000001NCATS NIH HHS UL1 TR000423NCATS NIH HHS UL1TR000423NCRR NIH HHS UL1 RR033179NICHD NIH HHS R01 HD058556NIEHS NIH HHS P30 ES007033NIEHS NIH HHS P30 ES07033NIGMS NIH HHS T32 GM007750
6 · The paper itself

Abstract

aimWe sought to discover endogenous urinary biomarkers of human CYP2D6 activity. PATIENTS &

methodsHealthy pediatric subjects (n = 189) were phenotyped using dextromethorphan and randomized for candidate biomarker selection and validation. Global urinary metabolomics was performed using liquid chromatography quadrupole time-of-flight mass spectrometry. Candidate biomarkers were tested in adults receiving fluoxetine, a CYP2D6 inhibitor.

resultsA biomarker, M1 (m/z 444.3102) was correlated with CYP2D6 activity in both the pediatric training and validation sets. Poor metabolizers had undetectable levels of M1, whereas it was present in subjects with other phenotypes. In adult subjects, a 9.56-fold decrease in M1 abundance was observed during CYP2D6 inhibition.

conclusionIdentification and validation of M1 may provide a noninvasive means of CYP2D6 phenotyping.

Indexed as

MetabolomicsAdolescentAdultBiomarkersChildCytochrome P-450 CYP2D6Cytochrome P-450 CYP2D6 InhibitorsDextromethorphanDextrorphanFemaleFluoxetineHealthy VolunteersHumansMaleBiomarkersCytochrome P-450 CYP2D6Cytochrome P-450 CYP2D6 InhibitorsDextromethorphanDextrorphanFluoxetinebiomarkerclinicalCYP2D6dextromethorphanendogenousfluoxetinemetabolomicspediatricphenotype

Identifiers

PMID25521354
PMCPMC4486214
OpenAlexW1964156477

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.