Evidence map›Paper›PMID 25520361›Full record

ArticleProceedings. Biological sciences2015

Variation in Drosophila melanogaster central metabolic genes appears driven by natural selection both within and between populations.

Rodrigo Cogni, Kate Kuczynski, Erik Lavington, Spencer Koury, Emily L Behrman, Katherine R O'Brien, Paul S Schmidt, Walter F Eanes

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings. Biological sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 35 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Early life-stage thermal resilience is determined by climate-linked regulatory variation.Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Rodrigo CogniDepartment of Ecology and Evolution, Stony Brook University, Stony Brook, NY 11794, USA.
Kate KuczynskiDepartment of Ecology and Evolution, Stony Brook University, Stony Brook, NY 11794, USA.
Erik LavingtonDepartment of Ecology and Evolution, Stony Brook University, Stony Brook, NY 11794, USA.
Spencer KouryDepartment of Ecology and Evolution, Stony Brook University, Stony Brook, NY 11794, USA.
Emily L BehrmanDepartment of Biology, University of Pennsylvania, Philadelphia, PA, USA.
Katherine R O'BrienDepartment of Biology, University of Pennsylvania, Philadelphia, PA, USA.
Paul S SchmidtDepartment of Biology, University of Pennsylvania, Philadelphia, PA, USA.
Walter F EanesDepartment of Ecology and Evolution, Stony Brook University, Stony Brook, NY 11794, USA walter.eanes@stonybrook.edu.
Stony Brook University · USUniversity of Pennsylvania · US

Funding

Metabolic and dopamine pathways in energy sensing and adaptation in DrosophilaR01GM090094 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI EANES, WALTER F., TRUE, JOHN R · 2010 to 2013
$1.2M
NIGMS NIH HHS GM090094NIGMS NIH HHS R01 GM090094
6 · The paper itself

Abstract

In this report, we examine the hypothesis that the drivers of latitudinal selection observed in the eastern US Drosophila melanogaster populations are reiterated within seasons in a temperate orchard population in Pennsylvania, USA. Specifically, we ask whether alleles that are apparently favoured in northern populations are also favoured early in the spring, and decrease in frequency from the spring to autumn with the population expansion. We use SNP data collected for 46 metabolic genes and 128 SNPs representing the central metabolic pathway and examine for the aggregate SNP allele frequencies whether the association of allele change with latitude and that with increasing days of spring-autumn season are reversed. Testing by random permutation, we observe a highly significant negative correlation between these associations that is consistent with this expectation. This correlation is stronger when we confine our analysis to only those alleles that show significant latitudinal changes. This pattern is not caused by association with chromosomal inversions. When data are resampled using SNPs for amino acid change the relationship is not significant but is supported when SNPs associated with cis-expression are only considered. Our results suggest that climate factors driving latitudinal molecular variation in a metabolic pathway are related to those operating on a seasonal level within populations.

Indexed as

Adaptation, PhysiologicalAllelesAnimalsDrosophila melanogasterDrosophila ProteinsPolymorphism, GeneticPolymorphism, Single NucleotideSeasonsSelection, GeneticDrosophila Proteinsclinesmetabolic genesnatural selectionseasonal selection

Identifiers

PMID25520361
PMCPMC4298213
OpenAlexW2055220501

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.