Evidence map›Paper›PMID 25520186›Full record

ArticleOpen biology2014

ATPase-dependent auto-phosphorylation of the open condensin hinge diminishes DNA binding.

Yuko Akai, Ryuta Kanai, Norihiko Nakazawa, Masahiro Ebe, Chikashi Toyoshima, Mitsuhiro Yanagida

Open access · goldAbstract read
In one paragraph

Article in Open biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Mitotic chromosomes.Seminars in cell & developmental biology · 2021
    Review
  2. Suppressor screening reveals common kleisin-hinge interaction in condensin and cohesin, but different modes of regulation.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  3. Article
  4. Article
  5. Suppressor mutation analysis combined with 3D modeling explains cohesin's capacity to hold and release DNA.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yuko AkaiOkinawa Institute of Science and Technology Graduate University, Onna-son, Okinawa 904-0495, Japan.
Ryuta KanaiInstitute of Molecular and Cellular Biosciences, The University of Tokyo, Tokyo 113-0032, Japan.
Norihiko NakazawaOkinawa Institute of Science and Technology Graduate University, Onna-son, Okinawa 904-0495, Japan.
Masahiro EbeOkinawa Institute of Science and Technology Graduate University, Onna-son, Okinawa 904-0495, Japan.
Chikashi ToyoshimaInstitute of Molecular and Cellular Biosciences, The University of Tokyo, Tokyo 113-0032, Japan.
Mitsuhiro YanagidaOkinawa Institute of Science and Technology Graduate University, Onna-son, Okinawa 904-0495, Japan myanagid@gmail.com.
Okinawa Institute of Science and Technology Graduate University · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Condensin, which contains two structural maintenance of chromosome (SMC) subunits and three regulatory non-SMC subunits, is essential for many chromosomal functions, including mitotic chromosome condensation and segregation. The ATPase domain of the SMC subunit comprises two termini connected by a long helical domain that is interrupted by a central hinge. The role of the ATPase domain has remained elusive. Here we report that the condensin SMC subunit of the fission yeast Schizosaccharomyces pombe is phosphorylated in a manner that requires the presence of the intact SMC ATPase Walker motif. Principal phosphorylation sites reside in the conserved, glycine-rich stretch at the hinge interface surrounded by the highly basic DNA-binding patch. Phosphorylation reduces affinity for DNA. Consistently, phosphomimetic mutants produce severe mitotic phenotypes. Structural evidence suggests that prior opening (though slight) of the hinge is necessary for phosphorylation, which is implicated in condensin's dissociation from and its progression along DNA.

Indexed as

Adenosine TriphosphatasesAmino Acid SequenceCatalytic DomainChromosomal Proteins, Non-HistoneConserved SequenceDNA-Binding ProteinsDNA, FungalModels, MolecularMultiprotein ComplexesMutationPhosphorylationProtein Structure, SecondarySchizosaccharomycesSchizosaccharomyces pombe ProteinsVanadatesAdenosine TriphosphatasesChromosomal Proteins, Non-Histonecondensin complexesDNA-Binding ProteinsDNA, FungalMultiprotein ComplexesSchizosaccharomyces pombe ProteinsVanadatesauto-phosphorylationcondensinDNA re-annealinghinge interfacehinge openingmass spectrometry

Identifiers

PMID25520186
PMCPMC4281712
OpenAlexW2099454224

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.