Evidence map›Paper›PMID 25519906›Full record

ArticleThe Journal of biological chemistry2015

Post-transcriptional regulation of programmed cell death 4 (PDCD4) mRNA by the RNA-binding proteins human antigen R (HuR) and T-cell intracellular antigen 1 (TIA1).

Callie P Wigington, Jeenah Jung, Emily A Rye, Sara L Belauret, Akahne M Philpot, Yue Feng, Philip J Santangelo, Anita H Corbett

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Review
  14. Targeting exosome-associated human antigen R attenuates fibrosis and inflammation in diabetic heart.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2020
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Callie P WigingtonFrom the Department of Biochemistry and Graduate Program in Biochemistry, Cell and Developmental Biology, Emory University, Atlanta, Georgia 30322.
Jeenah Jungthe Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology, and Emory University, Atlanta, Georgia 30332.
Emily A RyeFrom the Department of Biochemistry and Graduate Program in Biochemistry, Cell and Developmental Biology, Emory University, Atlanta, Georgia 30322.
Sara L Belauretthe School of Biology, Georgia Institute of Technology, Atlanta, Georgia 30322.
Akahne M PhilpotFrom the Department of Biochemistry and the Summer Scholars Research Program, Winship Cancer Institute, Atlanta, Georgia 30332, and.
Yue Fengthe Department of Pharmacology, Emory University School of Medicine, Atlanta, Georgia 30322.
Philip J Santangelothe Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology, and Emory University, Atlanta, Georgia 30332.
Anita H CorbettFrom the Department of Biochemistry and acorbe2@emory.edu.

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM008169 · NIGMS · EMORY UNIVERSITY · PI GROSS, ROBERT E · 1987 to 2021
$20.3M
Training Program in Biochemistry, Cell and Molecular BiologyT32GM008367 · NIGMS · EMORY UNIVERSITY · PI BOISE, LAWRENCE H., CORBETT, ANITA H. · 1990 to 2019
$5.6M
MOLECULAR BASIS OF RAN MEDIATED NUCLEAR TRANSPORTR01GM058728 · NIGMS · EMORY UNIVERSITY · PI CORBETT, ANITA H. · 1999 to 2016
$5.4M
Single RNA sensitive probes for studying viral replication and buddingR01GM094198 · NIGMS · GEORGIA INSTITUTE OF TECHNOLOGY · PI SANTANGELO, PHILIP J · 2010 to 2014
$2.0M
Translation regulation of BDNF in brain functionR01NS070526 · NINDS · EMORY UNIVERSITY · PI FENG, YUE · 2011 to 2015
$1.8M
Characterizing gene regulation with single molecule sensitive probesR21CA147922 · NCI · GEORGIA INSTITUTE OF TECHNOLOGY · PI SANTANGELO, PHILIP J · 2011 to 2013
$467k
A Role for the Novel Poly(A) RNA-Binding Protein, ZC3H14, in Breast CancerF31CA168321 · NCI · EMORY UNIVERSITY · PI WIGINGTON, CALLIE PREAST · 2012 to 2014
$84k
NCI NIH HHS F31 CA168321NCI NIH HHS R21 CA147922NIGMS NIH HHS R01 GM058728NIGMS NIH HHS R01 GM094198NIGMS NIH HHS T32 GM008169NIGMS NIH HHS T32 GM008367NINDS NIH HHS R01 NS070526
6 · The paper itself

Abstract

Post-transcriptional processing of mRNA transcripts plays a critical role in establishing the gene expression profile of a cell. Such processing events are mediated by a host of factors, including RNA-binding proteins and microRNAs. A number of critical cellular pathways are subject to regulation at multiple levels that allow fine-tuning of key biological responses. Programmed cell death 4 (PDCD4) is a tumor suppressor and an important modulator of mRNA translation that is regulated by a number of mechanisms, most notably as a target of the oncomiR, miR-21. Here, we provide evidence for post-transcriptional regulation of PDCD4 by the RNA-binding proteins, HuR and TIA1. Complementary approaches reveal binding of both HuR and TIA1 to the PDCD4 transcript. Consistent with a model where RNA-binding proteins modulate the PDCD4 transcript, knockdown of HuR and/or TIA1 results in a significant decrease in steady-state PDCD4 mRNA and protein levels. However, fractionation experiments suggest that the mode of regulation of the PDCD4 transcript likely differs in the cytoplasm and the nucleus as the pool of PDCD4 mRNA present in the cytoplasm is more stable than the nuclear pool of PDCD4 transcript. We observe a competitive mode of binding between HuR and TIA1 on the PDCD4 transcript in the cytoplasm, suggesting that these two factors dynamically interact with one another as well as the PDCD4 transcript to maintain tight control of PDCD4 levels. Overall, this study reveals an additional set of regulatory interactions that modulate the expression of PDCD4, a key pro-apoptotic factor, and also reveals new insights into how HuR and TIA1 functions are integrated to achieve such regulation.

Indexed as

RNA Processing, Post-TranscriptionalApoptosis Regulatory ProteinsCell NucleusCytoplasmELAV ProteinsHumansMCF-7 CellsPoly(A)-Binding ProteinsProtein BindingRNA-Binding ProteinsRNA, MessengerRNA StabilityT-Cell Intracellular Antigen-1Apoptosis Regulatory ProteinsELAV ProteinsPDCD4 protein, humanPoly(A)-Binding ProteinsRNA-Binding ProteinsRNA, MessengerT-Cell Intracellular Antigen-1TIA1 protein, humanHuRImagingPDCD4Post-transcriptional RegulationRNA-binding ProteinRNA ProcessingRNA-Protein InteractionTIA1

Identifiers

PMID25519906
PMCPMC4319015

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.