Evidence map›Paper›PMID 25519379›Full record

ArticleBMC proceedings2014

Combined linkage and family-based association analysis improves candidate gene detection in Genetic Analysis Workshop 18 simulation data.

Yi Li, Jia Nee Foo, Herty Liany, Hui-Qi Low, Jianjun Liu

Abstract read
In one paragraph

Article in BMC proceedings, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yi LiHuman Genetics, Genome Institute of Singapore, #02-01, Genome, 60 Biopolis Street, 138672, Republic of Singapore.
Jia Nee FooHuman Genetics, Genome Institute of Singapore, #02-01, Genome, 60 Biopolis Street, 138672, Republic of Singapore.
Herty LianyHuman Genetics, Genome Institute of Singapore, #02-01, Genome, 60 Biopolis Street, 138672, Republic of Singapore.
Hui-Qi LowHuman Genetics, Genome Institute of Singapore, #02-01, Genome, 60 Biopolis Street, 138672, Republic of Singapore.
Jianjun LiuHuman Genetics, Genome Institute of Singapore, #02-01, Genome, 60 Biopolis Street, 138672, Republic of Singapore.

Funding

GENETIC ANALYSIS OF COMMON DISEASES: AN EVALUATIONR01GM031575 · NIGMS · UNIVERSITY OF TEXAS RIO GRANDE VALLEY · PI ALMASY, LAURA A. · 1985 to 2016
$7.8M
NIGMS NIH HHS R01 GM031575
6 · The paper itself

Abstract

Because the genotype-phenotype correlation information is investigated differently by linkage and association analyses, various efforts have been made to model linkage and association jointly. However, joint modeling methods are usually computationally intensive; hence they cannot currently accommodate large pedigrees with dense markers. This article proposes a simple method to combine the linkage and association evidence with the aim of improving the detection power of disease susceptibility genes. Our detection power comparisons show that the combined linkage-association p values can improve remarkably the causal gene detection power in Genetic Analysis Workshop 18 simulation data.

Identifiers

PMID25519379
PMCPMC4143774

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.