Evidence map›Paper›PMID 25518935›Full record

ArticleMolecular biology of the cell2015

Identification of protein disulfide isomerase 1 as a key isomerase for disulfide bond formation in apolipoprotein B100.

Shiyu Wang, Shuin Park, Vamsi K Kodali, Jaeseok Han, Theresa Yip, Zhouji Chen, Nicholas O Davidson, Randal J Kaufman

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
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  4. Article
  5. Endoplasmic reticulum quality control in lipoprotein metabolism.Molecular and cellular endocrinology · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Shiyu WangDegenerative Diseases Research Program, Sanford-Burnham Medical Research Institute, La Jolla, CA 92037.
Shuin ParkDegenerative Diseases Research Program, Sanford-Burnham Medical Research Institute, La Jolla, CA 92037.
Vamsi K KodaliDegenerative Diseases Research Program, Sanford-Burnham Medical Research Institute, La Jolla, CA 92037.
Jaeseok HanSoonchunhyang Institute of Med-Bio Science, Soonchunhayng University, Cheonan-si, Choongchengnam-do 330-930, Republic of Korea.
Theresa YipDegenerative Diseases Research Program, Sanford-Burnham Medical Research Institute, La Jolla, CA 92037.
Zhouji ChenDivision of Geriatrics and Nutrition Sciences, Washington University School of Medicine, St. Louis, MO 63110.
Nicholas O DavidsonDivision of Gastroenterology, Department of Medicine, Washington University School of Medicine, St. Louis, MO 63110.
Randal J KaufmanDegenerative Diseases Research Program, Sanford-Burnham Medical Research Institute, La Jolla, CA 92037 rkaufman@sanfordburnham.org.
Sanford Burnham Prebys Medical Discovery Institute · USWashington University in St. Louis · USSoonchunhyang University · KR

Funding

Washington University DDRCC Supplemental Equipment RequestP30DK052574 · NIDDK · WASHINGTON UNIVERSITY · PI Nicholas O. Davidson · 2000 to 2026
$30.8M
Regulation of Factor VIII SecretionR01HL052173 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KAUFMAN, RANDAL J. · 1995 to 2014
$6.5M
HEPATIC SYNTHESIS AND SECRETION OF APOLIPOPROTEIN (A)R01DK056260 · NIDDK · WASHINGTON UNIVERSITY · PI DAVIDSON, NICHOLAS O. · 1999 to 2017
$5.9M
ENTEROHEPATIC LIPID FLUX AND APOPROTEIN BIOSYNTHESIS.R37HL038180 · NHLBI · WASHINGTON UNIVERSITY · PI DAVIDSON, NICHOLAS O. · 2000 to 2009
$5.1M
Role of the Unfolded Protein Response in Beta CellR37DK042394 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KAUFMAN, RANDAL J. · 2007 to 2016
$4.9M
ENTEROHEPATIC LIPID FLUX AND APOPROTEIN BIOSYNTHESISR01HL038180 · NHLBI · WASHINGTON UNIVERSITY · PI DAVIDSON, NICHOLAS O. · 1986 to 2018
$3.8M
Regulation of ER stress-induced cell deathR01DK088227 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KAUFMAN, RANDAL J. · 2010 to 2014
$3.1M
NHLBI NIH HHS HL-38180NHLBI NIH HHS R01 HL038180NHLBI NIH HHS R01 HL052173NHLBI NIH HHS R01HL052173NHLBI NIH HHS R37 HL038180NIDDK NIH HHS DK-52574NIDDK NIH HHS DK-56260NIDDK NIH HHS P30 DK052574NIDDK NIH HHS R01 DK056260NIDDK NIH HHS R01 DK088227NIDDK NIH HHS R01DK088227NIDDK NIH HHS R37 DK042394NIDDK NIH HHS R37DK042394
6 · The paper itself

Abstract

Apolipoprotein (apo) B is an obligatory component of very low density lipoprotein (VLDL), and its cotranslational and posttranslational modifications are important in VLDL synthesis, secretion, and hepatic lipid homeostasis. ApoB100 contains 25 cysteine residues and eight disulfide bonds. Although these disulfide bonds were suggested to be important in maintaining apoB100 function, neither the specific oxidoreductase involved nor the direct role of these disulfide bonds in apoB100-lipidation is known. Here we used RNA knockdown to evaluate both MTP-dependent and -independent roles of PDI1 in apoB100 synthesis and lipidation in McA-RH7777 cells. Pdi1 knockdown did not elicit any discernible detrimental effect under normal, unstressed conditions. However, it decreased apoB100 synthesis with attenuated MTP activity, delayed apoB100 oxidative folding, and reduced apoB100 lipidation, leading to defective VLDL secretion. The oxidative folding-impaired apoB100 was secreted mainly associated with LDL instead of VLDL particles from PDI1-deficient cells, a phenotype that was fully rescued by overexpression of wild-type but not a catalytically inactive PDI1 that fully restored MTP activity. Further, we demonstrate that PDI1 directly interacts with apoB100 via its redox-active CXXC motifs and assists in the oxidative folding of apoB100. Taken together, these findings reveal an unsuspected, yet key role for PDI1 in oxidative folding of apoB100 and VLDL assembly.

Indexed as

AnimalsApolipoprotein B-100Cell LineEndoplasmic ReticulumGene Knockdown TechniquesHomeostasisLipid MetabolismMiceOxidative StressProtein Disulfide-IsomerasesRatsApolipoprotein B-100Protein Disulfide-Isomerases

Identifiers

PMID25518935
PMCPMC4325832
OpenAlexW2016179814

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.