Evidence map›Paper›PMID 25518929›Full record

ArticleMolecules and cells2015

Comparative N-linked glycan analysis of wild-type and α1,3-galactosyltransferase gene knock-out pig fibroblasts using mass spectrometry approaches.

Hae-Min Park, Yoon-Woo Kim, Kyoung-Jin Kim, Young June Kim, Yung-Hun Yang, Jang Mi Jin, Young Hwan Kim, Byung-Gee Kim, Hosup Shim, Yun-Gon Kim

Open access · diamondAbstract readComparative Study
In one paragraph

Article in Molecules and cells, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Hae-Min ParkSchool of Chemical and Biological Engineering, Seoul National University, Seoul 151-742, Korea.
Yoon-Woo KimDepartment of Chemical Engineering, Soongsil University, Seoul 156-743, Korea.
Kyoung-Jin KimDepartment of Chemical Engineering, Soongsil University, Seoul 156-743, Korea.
Young June KimDepartment of Nanobiomedical Science and BK21+ NBM Global Research Center for Regenerative Medicine, Dankook University, Cheonan 330-714, Korea.
Yung-Hun YangDepartment of Microbial Engineering, College of Engineering, Konkuk University, Seoul 143-701, Korea.
Jang Mi JinDivision of Mass Spectrometry Research, Korea Basic Science Institute, Ochang 363-883, Korea.
Young Hwan KimDivision of Mass Spectrometry Research, Korea Basic Science Institute, Ochang 363-883, Korea ; Department of Bio-Analytical Science, University of Science and Technology, Daejeon 305-764, Korea.
Byung-Gee KimSchool of Chemical and Biological Engineering, Seoul National University, Seoul 151-742, Korea.
Hosup ShimDepartment of Nanobiomedical Science and BK21+ NBM Global Research Center for Regenerative Medicine, Dankook University, Cheonan 330-714, Korea.
Yun-Gon KimDepartment of Chemical Engineering, Soongsil University, Seoul 156-743, Korea.
Soongsil University · KRSeoul National University · KRKonkuk University · KRKorea Basic Science Institute · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Carbohydrate antigens expressed on pig cells are considered to be major barriers in pig-to-human xenotransplantation. Even after α1,3-galactosyltransferase gene knock-out (GalT-KO) pigs are generated, potential non-Gal antigens are still existed. However, to the best of our knowledge there is no extensive study analyzing N-glycans expressed on the GalT-KO pig tissues or cells. Here, we identified and quantified totally 47 N-glycans from wild-type (WT) and GalT-KO pig fibroblasts using mass spectrometry. First, our results confirmed the absence of galactose-alpha-1,3-galactose (α-Gal) residue in the GalT-KO pig cells. Interestingly, we showed that the level of overall fucosylated N-glycans from GalT-KO pig fibroblasts is much higher than from WT pig fibroblasts. Moreover, the relative quantity of the N-glycolylneuraminic acid (NeuGc) antigen is slightly higher in the GalT-KO pigs. Thus, this study will contribute to a better understanding of cellular glycan alterations on GalT-KO pigs for successful xenotransplantation.

Indexed as

AnimalsCell MembraneCells, CulturedFibroblastsGalactosyltransferasesGene Knockout TechniquesMass SpectrometryNeuraminic AcidsPolysaccharidesSwineGalactosyltransferasesNeuraminic AcidsN-glycolylneuraminic acidPolysaccharidesGalT-KO pig fibroblastmass spectrometry (MS)N-glycanN-glycolylneuraminic acid (NeuGc)

Identifiers

PMID25518929
PMCPMC4314127
OpenAlexW2322843448

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.