Evidence map›Paper›PMID 25518923›Full record

ArticleMolecules and cells2014

Comparative proteomic profiling of pancreatic ductal adenocarcinoma cell lines.

Yikwon Kim, Dohyun Han, Hophil Min, Jonghwa Jin, Eugene C Yi, Youngsoo Kim

Open access · diamondAbstract readComparative Study
In one paragraph

Article in Molecules and cells, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Proteomics in pancreatic cancer.Biomarker research · 2025
    Review
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  7. Article
  8. Article
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  10. Review
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  19. Review
  20. Mechanistic Actions betweenMolecules (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Yikwon KimDepartments of Biomedical Engineering, Medical Research Center, Seoul National University College of Medicine, Seoul 110-799 Korea.
Dohyun HanDepartments of Biomedical Engineering, Medical Research Center, Seoul National University College of Medicine, Seoul 110-799 Korea ; Institute of Medical and Biological Engineering, Medical Research Center, Seoul National University College of Medicine, Seoul 110-799 Korea.
Hophil MinDepartments of Biomedical Engineering, Medical Research Center, Seoul National University College of Medicine, Seoul 110-799 Korea.
Jonghwa JinDepartments of Biomedical Engineering, Medical Research Center, Seoul National University College of Medicine, Seoul 110-799 Korea.
Eugene C YiDepartment of Molecular Medicine and Biopharmaceutical Sciences, Graduate School of Convergence Science and Technology and College of Medicine or College of Pharmacy, Seoul National University, Seoul 110-799, Korea.
Youngsoo KimDepartments of Biomedical Engineering, Medical Research Center, Seoul National University College of Medicine, Seoul 110-799 Korea ; Institute of Medical and Biological Engineering, Medical Research Center, Seoul National University College of Medicine, Seoul 110-799 Korea.
Centre for Biomedical Engineering and Physics · SESeoul National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pancreatic cancer is one of the most fatal cancers and is associated with limited diagnostic and therapeutic modalities. Currently, gemcitabine is the only effective drug and represents the preferred first-line treatment for chemotherapy. However, a high level of intrinsic or acquired resistance of pancreatic cancer to gemcitabine can contribute to the failure of gemcitabine treatment. To investigate the underlying molecular mechanisms for gemcitabine resistance in pancreatic cancer, we performed label-free quantification of protein expression in intrinsic gemcitabine-resistant and - sensitive human pancreatic adenocarcinoma cell lines using our improved proteomic strategy, combined with filter-aided sample preparation, single-shot liquid chromatography-mass spectrometry, enhanced spectral counting, and a statistical method based on a power law global error model. We identified 1931 proteins and quantified 787 differentially expressed proteins in the BxPC3, PANC-1, and HPDE cell lines. Bioinformatics analysis identified 15 epithelial to mesenchymal transition (EMT) markers and 13 EMT-related proteins that were closely associated with drug resistance were differentially expressed. Interestingly, 8 of these proteins were involved in glutathione and cysteine/methionine metabolism. These results suggest that proteins related to the EMT and glutathione metabolism play important roles in the development of intrinsic gemcitabine resistance by pancreatic cancer cell lines.

Indexed as

Biomarkers, TumorCarcinoma, Pancreatic DuctalCell Line, TumorDeoxycytidineDrug Resistance, NeoplasmEpithelial-Mesenchymal TransitionGemcitabineGene Expression Regulation, NeoplasticGlutathioneHumansMass SpectrometryPancreatic NeoplasmsProteomicsBiomarkers, TumorDeoxycytidineGemcitabineGlutathionechemoresistancegemcitabineLC-MS/MSpancreatic cancerquantitative Proteomics

Identifiers

PMID25518923
PMCPMC4275706
OpenAlexW2322143937

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.