Evidence map›Paper›PMID 25518894›Full record

ArticleNature communications2014

Live-cell multiplane three-dimensional super-resolution optical fluctuation imaging.

Stefan Geissbuehler, Azat Sharipov, Aurélien Godinat, Noelia L Bocchio, Patrick A Sandoz, Anja Huss, Nickels A Jensen, Stefan Jakobs, Jörg Enderlein, F Gisou van der Goot and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Nature communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
16.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 168 citations in OpenAlex.

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  19. Biophysical reports · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Stefan Geissbuehlercole Polytechnique Fédérale de Lausanne, Laboratoire d'Optique Biomédicale, 1015 Lausanne, Switzerland.
Azat Sharipovcole Polytechnique Fédérale de Lausanne, Laboratoire d'Optique Biomédicale, 1015 Lausanne, Switzerland.
Aurélien Godinatcole Polytechnique Fédérale de Lausanne, Laboratory of Bioorganic Chemistry and Molecular Imaging, Institute of Chemical Sciences and Engineering (ISIC), 1015 Lausanne, Switzerland.
Noelia L Bocchiocole Polytechnique Fédérale de Lausanne, Laboratoire d'Optique Biomédicale, 1015 Lausanne, Switzerland.
Patrick A Sandozcole Polytechnique Fédérale de Lausanne, Global Health Institute, 1015 Lausanne, Switzerland.
Anja HussGeorg August University, III. Institute of Physics, 37077 Göttingen, Germany.
Nickels A JensenMax Planck Institute for Biophysical Chemistry, Department of NanoBiophotonics, 37077 Göttingen, Germany.
Stefan JakobsMax Planck Institute for Biophysical Chemistry, Department of NanoBiophotonics, 37077 Göttingen, Germany.
Jörg EnderleinGeorg August University, III. Institute of Physics, 37077 Göttingen, Germany.
F Gisou van der Gootcole Polytechnique Fédérale de Lausanne, Global Health Institute, 1015 Lausanne, Switzerland.
Elena A Dubikovskayacole Polytechnique Fédérale de Lausanne, Laboratory of Bioorganic Chemistry and Molecular Imaging, Institute of Chemical Sciences and Engineering (ISIC), 1015 Lausanne, Switzerland.
Theo Lassercole Polytechnique Fédérale de Lausanne, Laboratoire d'Optique Biomédicale, 1015 Lausanne, Switzerland.
Marcel Leuteneggercole Polytechnique Fédérale de Lausanne, Laboratoire d'Optique Biomédicale, 1015 Lausanne, Switzerland.
Max Planck Institute for Biophysical Chemistry · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Super-resolution optical fluctuation imaging (SOFI) provides an elegant way of overcoming the diffraction limit in all three spatial dimensions by computing higher-order cumulants of image sequences of blinking fluorophores acquired with a classical widefield microscope. Previously, three-dimensional (3D) SOFI has been demonstrated by sequential imaging of multiple depth positions. Here we introduce a multiplexed imaging scheme for the simultaneous acquisition of multiple focal planes. Using 3D cross-cumulants, we show that the depth sampling can be increased. The simultaneous acquisition of multiple focal planes significantly reduces the acquisition time and thus the photobleaching. We demonstrate multiplane 3D SOFI by imaging fluorescently labelled cells over an imaged volume of up to 65 × 65 × 3.5 μm(3) without depth scanning. In particular, we image the 3D network of mitochondria in fixed C2C12 cells immunostained with Alexa 647 fluorophores and the 3D vimentin structure in living Hela cells expressing the fluorescent protein Dreiklang.

Indexed as

AnimalsCarbocyaninesCell LineFluorescent DyesGreen Fluorescent ProteinsHeLa CellsHumansImaging, Three-DimensionalMiceMicroscopy, FluorescenceMitochondriaMolecular ImagingMyoblastsVimentinAlexa Fluor 647CarbocyaninesFluorescent DyesGreen Fluorescent ProteinsVimentin

Identifiers

PMID25518894
PMCPMC4284648
OpenAlexW2136897231

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.