Evidence map›Paper›PMID 25518064›Full record

ArticleMolecular systems biology2014

Protein acetylation affects acetate metabolism, motility and acid stress response in Escherichia coli.

Sara Castaño-Cerezo, Vicente Bernal, Harm Post, Tobias Fuhrer, Salvatore Cappadona, Nerea C Sánchez-Díaz, Uwe Sauer, Albert J R Heck, A F Maarten Altelaar, Manuel Cánovas

Open access · goldAbstract read
In one paragraph

Article in Molecular systems biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 145 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
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  5. Characterization of the Nicotinamide Adenine Dinucleotide Biosynthesis Pathway and Regulatory Mechanisms in Streptococcus mutans.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
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  7. Article
  8. Article
  9. Article
  10. Article
  11. Bacterial protein acetylation: mechanisms, functions, and methods for study.Frontiers in cellular and infection microbiology · 2024
    Review
  12. Characterizing lysine acetylation of glucokinase.Protein science : a publication of the Protein Society · 2024
    Article
  13. Article
  14. Article
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  20. The gateway to guanine nucleotides: Allosteric regulation of IMP dehydrogenases.Protein science : a publication of the Protein Society · 2022
    Review

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Sara Castaño-CerezoDepartamento de Bioquímica y Biología Molecular B e Inmunología, Facultad de Química, Universidad de Murcia Campus de Excelencia Mare Nostrum, Murcia, Spain.
Vicente BernalDepartamento de Bioquímica y Biología Molecular B e Inmunología, Facultad de Química, Universidad de Murcia Campus de Excelencia Mare Nostrum, Murcia, Spain vicente.bernal@gmail.com mcanovas@um.es.
Harm PostBiomolecular Mass Spectrometry and Proteomics Group, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, The Netherlands Netherlands Proteomics Center, Utrecht, The Netherlands.
Tobias FuhrerInstitute of Molecular Systems Biology, ETH Zurich, Zurich, Switzerland.
Salvatore CappadonaBiomolecular Mass Spectrometry and Proteomics Group, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, The Netherlands.
Nerea C Sánchez-DíazDepartamento de Bioquímica y Biología Molecular B e Inmunología, Facultad de Química, Universidad de Murcia Campus de Excelencia Mare Nostrum, Murcia, Spain.
Uwe SauerInstitute of Molecular Systems Biology, ETH Zurich, Zurich, Switzerland.
Albert J R HeckBiomolecular Mass Spectrometry and Proteomics Group, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, The Netherlands Netherlands Proteomics Center, Utrecht, The Netherlands.
A F Maarten AltelaarBiomolecular Mass Spectrometry and Proteomics Group, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, The Netherlands Netherlands Proteomics Center, Utrecht, The Netherlands.
Manuel CánovasDepartamento de Bioquímica y Biología Molecular B e Inmunología, Facultad de Química, Universidad de Murcia Campus de Excelencia Mare Nostrum, Murcia, Spain vicente.bernal@gmail.com mcanovas@um.es.
Universidad de Murcia · ESUtrecht University · NLETH Zurich · CHNetherlands Metabolomics Centre · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although protein acetylation is widely observed, it has been associated with few specific regulatory functions making it poorly understood. To interrogate its functionality, we analyzed the acetylome in Escherichia coli knockout mutants of cobB, the only known sirtuin-like deacetylase, and patZ, the best-known protein acetyltransferase. For four growth conditions, more than 2,000 unique acetylated peptides, belonging to 809 proteins, were identified and differentially quantified. Nearly 65% of these proteins are related to metabolism. The global activity of CobB contributes to the deacetylation of a large number of substrates and has a major impact on physiology. Apart from the regulation of acetyl-CoA synthetase, we found that CobB-controlled acetylation of isocitrate lyase contributes to the fine-tuning of the glyoxylate shunt. Acetylation of the transcription factor RcsB prevents DNA binding, activating flagella biosynthesis and motility, and increases acid stress susceptibility. Surprisingly, deletion of patZ increased acetylation in acetate cultures, which suggests that it regulates the levels of acetylating agents. The results presented offer new insights into functional roles of protein acetylation in metabolic fitness and global cell regulation.

Indexed as

Protein Processing, Post-TranslationalAcetate-CoA LigaseAcetatesAcetylationAcetyltransferasesBacterial ProteinsChromosome MappingDNA-Binding ProteinsEscherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialGlutamate DecarboxylaseGlyoxylatesOligonucleotide Array Sequence AnalysisProteomicsSirtuinsAcetate-CoA LigaseAcetatesAcetyltransferasesBacterial ProteinscobB protein, E ColiDNA-Binding ProteinsEscherichia coli ProteinsGlutamate DecarboxylaseGlyoxylatesglyoxylic acidprotein acyltransferaseRcsB protein, BacteriaSirtuinsflagella biosynthesisisocitrate lyasemetabolic regulationsirtuin

Identifiers

PMID25518064
PMCPMC4299603
OpenAlexW2159556209

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.