Evidence map›Paper›PMID 25517934›Full record

ArticleeLife2014

Quantitative microscopy of functional HIV post-entry complexes reveals association of replication with the viral capsid.

Ke Peng, Walter Muranyi, Bärbel Glass, Vibor Laketa, Stephen R Yant, Luong Tsai, Tomas Cihlar, Barbara Müller, Hans-Georg Kräusslich

Open access · goldAbstract read
In one paragraph

Article in eLife, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 121 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
121citing papers in PubMed, 1 pooled it
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

121 citing papers in PubMed, 1 synthesis or guideline pooled it, 164 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

61 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Ke PengDepartment of Infectious Diseases, Virology, University of Heidelberg, Heidelberg, Germany.
Walter MuranyiDepartment of Infectious Diseases, Virology, University of Heidelberg, Heidelberg, Germany.
Bärbel GlassDepartment of Infectious Diseases, Virology, University of Heidelberg, Heidelberg, Germany.
Vibor LaketaDepartment of Infectious Diseases, Virology, University of Heidelberg, Heidelberg, Germany.
Stephen R YantGilead Sciences Inc., Foster City, United States.
Luong TsaiGilead Sciences Inc., Foster City, United States.
Tomas CihlarGilead Sciences Inc., Foster City, United States.
Barbara MüllerDepartment of Infectious Diseases, Virology, University of Heidelberg, Heidelberg, Germany.
Hans-Georg KräusslichDepartment of Infectious Diseases, Virology, University of Heidelberg, Heidelberg, Germany.
Heidelberg University · DEGilead Sciences (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The steps from HIV-1 cytoplasmic entry until integration of the reverse transcribed genome are currently enigmatic. They occur in ill-defined reverse-transcription- and pre-integration-complexes (RTC, PIC) with various host and viral proteins implicated. In this study, we report quantitative detection of functional RTC/PIC by labeling nascent DNA combined with detection of viral integrase. We show that the viral CA (capsid) protein remains associated with cytoplasmic RTC/PIC but is lost on nuclear PIC in a HeLa-derived cell line. In contrast, nuclear PIC were almost always CA-positive in primary human macrophages, indicating nuclear import of capsids or capsid-like structures. We further show that the CA-targeted inhibitor PF74 exhibits a bimodal mechanism, blocking RTC/PIC association with the host factor CPSF6 and nuclear entry at low, and abrogating reverse transcription at high concentrations. The newly developed system is ideally suited for studying retroviral post-entry events and the roles of host factors including DNA sensors and signaling molecules.

Indexed as

Active Transport, Cell Nucleusbeta KaryopherinsCapsid ProteinsCell Line, TumorCell NucleusCytosolDNA, ViralGene Expression RegulationHEK293 CellsHeLa CellsHIV-1HIV IntegraseHost-Pathogen InteractionsHumansIndolesMacrophagesbeta KaryopherinsCapsid Proteinscleavage factor Im, humanDNA, ViralHIV IntegraseIndolesmRNA Cleavage and Polyadenylation FactorsPF-3450074PhenylalanineTNPO3 protein, humanCPSF6HIVinfectious diseasemacrophagesmicrobiologyreverse transcriptionviral entryviruses

Identifiers

PMID25517934
PMCPMC4293571
OpenAlexW2161091256

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.