Evidence map›Paper›PMID 25516138›Full record

ArticleBMC medical genetics2014

Recessive thrombocytopenia likely due to a homozygous pathogenic variant in the FYB gene: case report.

Hanan Hamamy, Periklis Makrythanasis, Nasir Al-Allawi, Abdulrahman A Muhsin, Stylianos E Antonarakis

Open access · goldAbstract readCase Reports
In one paragraph

Article in BMC medical genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Hanan HamamyDepartment of Genetic Medicine and Development, University of Geneva, Geneva, Switzerland. hananhamamy@yahoo.com.
Periklis MakrythanasisDepartment of Genetic Medicine and Development, University of Geneva, Geneva, Switzerland. Periklis.Makrythanasis@unige.ch.
Nasir Al-AllawiDepartment of Pathology, College of Medicine, University of Dohuk, Dohuk, Iraq. nallawi@yahoo.com.
Abdulrahman A MuhsinHematology/Oncology unit, JIN Center, Dohuk, Iraq. abd_zakholly@yahoo.com.
Stylianos E AntonarakisDepartment of Genetic Medicine and Development, University of Geneva, Geneva, Switzerland. Stylianos.Antonarakis@unige.ch.
University of Duhok · IQUniversity of Geneva · CHUniversity Hospital of Geneva · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundInherited thrombocytopenias (IT) are a heterogeneous group of rare diseases characterized by a reduced number of blood platelets. The frequency of IT is probably underestimated because of diagnostic difficulties and because not all the existing forms have as yet been identified, with some patients remaining without a definitive diagnosis. Exome Sequencing has made possible the identification of almost all variants in the coding regions of protein-coding genes, thereby providing the opportunity to identify the disease causing gene in a number of patients with indefinite diagnoses, specifically in consanguineous families. CASE PRESENTATION: Familial thrombocytopenia with small size platelets was present in several members of a highly consanguineous family from Northern Iraq. Genotyping of all affected, their unaffected siblings and parents, followed by exome sequencing revealed a strong candidate loss of function variant in a homozygous state: a frameshift mutation in the FYB gene. The protein encoded by this gene is known to be a cytosolic adaptor molecule expressed by T, natural killer (NK), myeloid cells and platelets, and is involved in platelet activation and controls the expression of interleukin-2. Knock-out mice were reported to show isolated thrombocytopenia.

conclusionInherited thrombocytopenias differ in their presentation, associated features, and molecular etiologies. An accurate diagnosis is needed to provide appropriate management as well as counseling for the individuals and their family members. Exome sequencing may become a first diagnostic tool to identify the molecular basis of undiagnosed familial IT. In this report, the clinical evaluation combined with the power and efficiency of genomic analysis defined the FYB gene as the possible underlying cause of autosomal recessive thrombocytopenia with small platelet size. This is the first report linking pathogenic variants in FYB and thrombocytopenia in humans.

Indexed as

Adaptor Proteins, Signal TransducingDNA Mutational AnalysisExomeFemaleFrameshift MutationGenes, RecessiveHumansInfantIraqMalePedigreeThrombocytopeniaAdaptor Proteins, Signal TransducingFYB1 protein, human

Identifiers

PMID25516138
PMCPMC4411870
OpenAlexW2058118641

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.