Evidence map›Paper›PMID 25515930›Full record

ArticleJournal of biological physics2015

A novel minimal in vitro system for analyzing HIV-1 Gag-mediated budding.

Dong Gui, Sharad Gupta, Jun Xu, Roya Zandi, Sarjeet Gill, I-Chueh Huang, A L N Rao, Umar Mohideen

Open access · bronzeAbstract read
In one paragraph

Article in Journal of biological physics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Dong GuiDepartment of Physics & Astronomy, University of California, Riverside, CA, 92521, USA.
Sharad Gupta
Jun Xu
Roya Zandi
Sarjeet Gill
I-Chueh Huang
A L N Rao
Umar Mohideen
University of California, Riverside · US

Funding

The Functions of IFITM Proteins in Control of Influenza A Virus InfectionR01AI100953 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HUANG, I-CHUEH · 2013 to 2017
$2.0M
The Mechanisms of IFITM-Mediated RestrictionR00AI093679 · NIAID · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI HUANG, I-CHUEH · 2012 to 2013
$489k
NIAID NIH HHS R00 AI093679NIAID NIH HHS R01 AI100953
6 · The paper itself

Abstract

A biomimetic minimalist model membrane was used to study the mechanism and kinetics of cell-free in vitro HIV-1 Gag budding from a giant unilamellar vesicle (GUV). Real-time interaction of Gag, RNA, and lipid, leading to the formation of mini-vesicles, was measured using confocal microscopy. Gag forms resolution-limited punctae on the GUV lipid membrane. Introduction of the Gag and urea to a GUV solution containing RNA led to the budding of mini-vesicles on the inside surface of the GUV. The GUV diameter showed a linear decrease in time due to bud formation. Both bud formation and decrease in GUV size were proportional to Gag concentration. In the absence of RNA, addition of urea to GUVs incubated with Gag also resulted in subvesicle formation. These observations suggest the possibility that clustering of GAG proteins leads to membrane invagination even in the absence of host cell proteins. The method presented here is promising, and allows for systematic study of the dynamics of assembly of immature HIV and help classify the hierarchy of factors that impact the Gag protein initiated assembly of retroviruses such as HIV.

Indexed as

Virus ReleaseCell Membranegag Gene Products, Human Immunodeficiency VirusHIV-1KineticsRNA, ViralUnilamellar LiposomesUreagag Gene Products, Human Immunodeficiency VirusRNA, ViralUnilamellar LiposomesUrea

Identifiers

PMID25515930
PMCPMC4366436
OpenAlexW2133032377

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.