Evidence map›Paper›PMID 25515696›Full record

ArticlePlant molecular biology2015

Rice phenylalanine ammonia-lyase gene OsPAL4 is associated with broad spectrum disease resistance.

Bradley W Tonnessen, Patricia Manosalva, Jillian M Lang, Marietta Baraoidan, Alicia Bordeos, Ramil Mauleon, James Oard, Scot Hulbert, Hei Leung, Jan E Leach

Abstract read
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In one paragraph

Article in Plant molecular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 101 papers.

0numbers the graph read from it
0cells of the map it votes in
101citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

101 citing papers in PubMed, 222 citations in OpenAlex.

  1. Comprehensive Profiling of the RicePlants (Basel, Switzerland) · 2026
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  4. From Defense Executor to Engineering Target: Harnessing Lignin for Crop Resistance.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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  15. Citrate pretreatment promotes rice (Plant biotechnology (Tokyo, Japan) · 2025
    Article
  16. A WRKY transcription factor confers broad-spectrum resistance to biotic stresses and yield stability in rice.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  17. Journal of fungi (Basel, Switzerland) · 2025
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  18. Metabolomic profiling ofFrontiers in plant science · 2025
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41 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Bradley W TonnessenDepartment of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, CO, 80523-1177, USA.
Patricia Manosalva
Jillian M Lang
Marietta Baraoidan
Alicia Bordeos
Ramil Mauleon
James Oard
Scot Hulbert
Hei Leung
Jan E Leach
International Rice Research Institute · PHColorado State University · USCornell University · USLouisiana State University Agricultural Center · USWashington State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Most agronomically important traits, including resistance against pathogens, are governed by quantitative trait loci (QTL). QTL-mediated resistance shows promise of being effective and long-lasting against diverse pathogens. Identification of genes controlling QTL-based disease resistance contributes to breeding for cultivars that exhibit high and stable resistance. Several defense response genes have been successfully used as good predictors and contributors to QTL-based resistance against several devastating rice diseases. In this study, we identified and characterized a rice (Oryza sativa) mutant line containing a 750 bp deletion in the second exon of OsPAL4, a member of the phenylalanine ammonia-lyase gene family. OsPAL4 clusters with three additional OsPAL genes that co-localize with QTL for bacterial blight and sheath blight disease resistance on rice chromosome 2. Self-pollination of heterozygous ospal4 mutant lines produced no homozygous progeny, suggesting that homozygosity for the mutation is lethal. The heterozygous ospal4 mutant line exhibited increased susceptibility to three distinct rice diseases, bacterial blight, sheath blight, and rice blast. Mutation of OsPAL4 increased expression of the OsPAL2 gene and decreased the expression of the unlinked OsPAL6 gene. OsPAL2 function is not redundant because the changes in expression did not compensate for loss of disease resistance. OsPAL6 co-localizes with a QTL for rice blast resistance, and is down-regulated in the ospal4 mutant line; this may explain enhanced susceptibility to Magnoporthe oryzae. Overall, these results suggest that OsPAL4 and possibly OsPAL6 are key contributors to resistance governed by QTL and are potential breeding targets for improved broad-spectrum disease resistance in rice.

Indexed as

Genes, PlantDisease ResistanceExonsGene ExpressionMagnaportheMultigene FamilyOryzaPhenylalanine Ammonia-LyasePhylogenyPlant DiseasesPlant ProteinsQuantitative Trait LociSeedlingsSequence DeletionPhenylalanine Ammonia-LyasePlant Proteins

Identifiers

PMID25515696
OpenAlexW2060640597

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.