Evidence map›Paper›PMID 25512573›Full record

ArticleLearning & memory (Cold Spring Harbor, N.Y.)2014

Transcriptional analysis of a whole-body form of long-term habituation in Aplysia californica.

Geraldine Holmes, Samantha Herdegen, Jonathan Schuon, Ashly Cyriac, Jamie Lass, Catherine Conte, Irina E Calin-Jageman, Robert J Calin-Jageman

Open access · diamondAbstract read
In one paragraph

Article in Learning & memory (Cold Spring Harbor, N.Y.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Geraldine HolmesNeuroscience Program, Dominican University, River Forest, Illinois, USA.
Samantha HerdegenNeuroscience Program, Dominican University, River Forest, Illinois, USA.
Jonathan SchuonNeuroscience Program, Dominican University, River Forest, Illinois, USA.
Ashly CyriacNeuroscience Program, Dominican University, River Forest, Illinois, USA.
Jamie LassNeuroscience Program, Dominican University, River Forest, Illinois, USA.
Catherine ConteNeuroscience Program, Dominican University, River Forest, Illinois, USA.
Irina E Calin-JagemanNeuroscience Program, Dominican University, River Forest, Illinois, USA.ORCID http://orcid.org/0000-0002-2529-4223
Robert J Calin-JagemanNeuroscience Program, Dominican University, River Forest, Illinois, USA rcalinjageman@dom.edu.ORCID http://orcid.org/0000-0002-9837-6529
Dominican University · US

Funding

Mechanisms in the Expression and Decay of Long-Term Habituation MemoryR15MH090998 · NIMH · DOMINICAN UNIVERSITY · PI CALIN-JAGEMAN, ROBERT JOSEPH · 2010 to 2010
$362k
NIMH NIH HHS 1R15MH090998-01NIMH NIH HHS R15 MH090998
6 · The paper itself

Abstract

Habituation is the simplest form of learning, but we know little about the transcriptional mechanisms that encode long-term habituation memory. A key obstacle is that habituation is relatively stimulus-specific and is thus encoded in small sets of neurons, providing poor signal/noise ratios for transcriptional analysis. To overcome this obstacle, we have developed a protocol for producing whole-body long-term habituation of the siphon-withdrawal reflex (SWR) of Aplysia californica. Specifically, we constructed a computer-controlled brushing apparatus to apply low-intensity tactile stimulation over the entire dorsal surface of Aplysia at regular intervals. We found that 3 d of training (10 rounds of stimulation/day; each round = 15 min brushing at a 10-sec ISI; 15-min rest between rounds) produces habituation with several characteristics favorable for mechanistic investigation. First, habituation is widespread, with SWR durations reduced whether the reflex is evoked by tactile stimulation to the head, tail, or the siphon. Second, long-term habituation is sensitive to the pattern of training, occurring only when brushing sessions are spaced out over 3 d rather than massed into a single session. Using a custom-designed microarray and quantitative PCR, we show that long-term habituation produces long-term up-regulation of an apparent Aplysia homolog of cornichon, a protein important for glutamate receptor trafficking. Our training paradigm provides a promising starting point for characterizing the transcriptional mechanisms of long-term habituation memory.

Indexed as

AnimalsAplysiaComputersElectroshockGanglia, InvertebrateHabituation, PsychophysiologicHeadMemoryMicroarray AnalysisModels, AnimalPhysical StimulationPolymerase Chain ReactionSensory Receptor CellsTailTouchTranscription, Genetic

Identifiers

PMID25512573
PMCPMC4274328
OpenAlexW2085523671

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.