Evidence map›Paper›PMID 25512533›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Revealing bacterial targets of growth inhibitors encoded by bacteriophage T7.

Shahar Molshanski-Mor, Ido Yosef, Ruth Kiro, Rotem Edgar, Miriam Manor, Michael Gershovits, Mia Laserson, Tal Pupko, Udi Qimron

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.2field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Investigating the effect of bacteriophages on bacterial FtsZ localisation.Frontiers in cellular and infection microbiology · 2022
    Article
  9. A phage mechanism for selective nicking of dUMP-containing DNA.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Microbial cyclophilins: specialized functions in virulence and beyond.World journal of microbiology & biotechnology · 2017
    Review
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Shahar Molshanski-MorDepartment of Clinical Microbiology and Immunology, Sackler School of Medicine, and.
Ido YosefDepartment of Clinical Microbiology and Immunology, Sackler School of Medicine, and.
Ruth KiroDepartment of Clinical Microbiology and Immunology, Sackler School of Medicine, and.
Rotem EdgarDepartment of Clinical Microbiology and Immunology, Sackler School of Medicine, and.
Miriam ManorDepartment of Clinical Microbiology and Immunology, Sackler School of Medicine, and.
Michael GershovitsDepartment of Cell Research and Immunology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel.
Mia LasersonDepartment of Cell Research and Immunology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel.
Tal PupkoDepartment of Cell Research and Immunology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel.
Udi QimronDepartment of Clinical Microbiology and Immunology, Sackler School of Medicine, and ehudq@post.tau.ac.il.ORCID http://orcid.org/0000-0003-2169-5270
Arthur M. Sackler Gallery · USTel Aviv University · IL

Funding

European Research Council 336079
6 · The paper itself

Abstract

Today's arsenal of antibiotics is ineffective against some emerging strains of antibiotic-resistant pathogens. Novel inhibitors of bacterial growth therefore need to be found. The target of such bacterial-growth inhibitors must be identified, and one way to achieve this is by locating mutations that suppress their inhibitory effect. Here, we identified five growth inhibitors encoded by T7 bacteriophage. High-throughput sequencing of genomic DNA of resistant bacterial mutants evolving against three of these inhibitors revealed unique mutations in three specific genes. We found that a nonessential host gene, ppiB, is required for growth inhibition by one bacteriophage inhibitor and another nonessential gene, pcnB, is required for growth inhibition by a different inhibitor. Notably, we found a previously unidentified growth inhibitor, gene product (Gp) 0.6, that interacts with the essential cytoskeleton protein MreB and inhibits its function. We further identified mutations in two distinct regions in the mreB gene that overcome this inhibition. Bacterial two-hybrid assay and accumulation of Gp0.6 only in MreB-expressing bacteria confirmed interaction of MreB and Gp0.6. Expression of Gp0.6 resulted in lemon-shaped bacteria followed by cell lysis, as previously reported for MreB inhibitors. The described approach may be extended for the identification of new growth inhibitors and their targets across bacterial species and in higher organisms.

Indexed as

Bacteriophage T7DNA, ViralEscherichia coliEscherichia coli ProteinsGenome, ViralPolynucleotide AdenylyltransferaseViral ProteinsDNA, ViralEscherichia coli ProteinsMreB protein, E colipcnB protein, E coliPolynucleotide AdenylyltransferaseViral Proteinsbacterial cytoskeletonbacteriophage biologyhigh-throughput DNA sequencinghost takeovertarget identification

Identifiers

PMID25512533
PMCPMC4284602
OpenAlexW1965525196

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.