Evidence map›Paper›PMID 25512514›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Stable, uncleaved HIV-1 envelope glycoprotein gp140 forms a tightly folded trimer with a native-like structure.

James M Kovacs, Erik Noeldeke, Heather Jiwon Ha, Hanqin Peng, Sophia Rits-Volloch, Stephen C Harrison, Bing Chen

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 67 citations in OpenAlex.

  1. Developing Antiviral Vaccines Based on AttenuatedPathogens (Basel, Switzerland) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 4 countries.

James M KovacsLaboratory of Molecular Medicine and.
Erik NoeldekeUniversity of Tuebingen, D-72076 Tuebingen, Germany.
Heather Jiwon HaLaboratory of Molecular Medicine and.
Hanqin PengLaboratory of Molecular Medicine and.
Sophia Rits-VollochLaboratory of Molecular Medicine and.
Stephen C HarrisonLaboratory of Molecular Medicine and Howard Hughes Medical Institute, Boston Children's Hospital and Harvard Medical School, Boston, MA 02115; and bchen@crystal.harvard.edu harrison@crystal.harvard.edu.
Bing ChenLaboratory of Molecular Medicine and bchen@crystal.harvard.edu harrison@crystal.harvard.edu.
Institute of Molecular Medicine · INHarvard University · USUniversity of Tübingen · DE

Funding

Impact of HIV Envelope Conformation on ImmunogenicityR01AI084794 · NIAID · BETH ISRAEL DEACONESS MEDICAL CENTER · PI BAROUCH, DAN H., CHEN, BING · 2009 to 2013
$4.0M
Crystallographic studies of intact and fully glycosylated HIV-1 gp120R01AI106488 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI CHEN, BING · 2013 to 2017
$2.2M
Biochemical and structural studies of distinct conformational states of gp41R01GM083680 · NIGMS · BOSTON CHILDREN'S HOSPITAL · PI CHEN, BING · 2009 to 2013
$1.8M
Howard Hughes Medical InstituteNIAID NIH HHS AI084794NIAID NIH HHS R01 AI084794NIAID NIH HHS R01 AI106488NIGMS NIH HHS GM083680NIGMS NIH HHS R01 GM083680
6 · The paper itself

Abstract

The HIV-1 envelope spike [trimeric (gp160)3, cleaved to (gp120/gp41)3] is the mediator of viral entry and the principal target of humoral immune response to the virus. Production of a recombinant preparation that represents the functional spike poses a challenge for vaccine development, because the (gp120/gp41)3 complex is prone to dissociation. We have reported previously that stable HIV-1 gp140 trimers, the uncleaved ectodomains of (gp160)3, have nearly all of the antigenic properties expected for native viral spikes. Because of recent claims that uncleaved gp140 proteins may adopt a nonnative structure with three gp120 moieties "dangling" from a trimeric gp41 ectodomain in its postfusion conformation, we have inserted a long, flexible linker between gp120 and gp41 in our stable gp140 trimers to assess their stability and to analyze their conformation in solution. The modified trimer has biochemical and antigenic properties virtually identical to those of its unmodified counterpart. Both forms bind a single CD4 per trimer, suggesting that the trimeric conformation occludes two of the three CD4 sites even when a flexible linker has relieved the covalent constraint between gp120 and gp41. In contrast, an artificial trimer containing three gp120s flexibly tethered to a trimerization tag binds three CD4s and has antigenicity nearly identical to that of monomeric gp120. Moreover, the gp41 part of both modified and unmodified gp140 trimers has a structure very different from that of postfusion gp41. These results show that uncleaved gp140 trimers from suitable isolates have compact, native-like structures and support their use as candidate vaccine immunogens.

Indexed as

Models, MolecularProtein FoldingProtein MultimerizationAnimalsCHO CellsCricetinaeCricetulusenv Gene Products, Human Immunodeficiency VirusHIV-1HumansProtein Structure, Quaternaryenv Gene Products, Human Immunodeficiency Virusgp140 envelope protein, Human immunodeficiency virus 1envelopegp140HIV-1immunogen

Identifiers

PMID25512514
PMCPMC4284565
OpenAlexW2005752122

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.