Evidence map›Paper›PMID 25512375›Full record

ArticleThe Journal of biological chemistry2015

The B-type channel is a major route for iron entry into the ferroxidase center and central cavity of bacterioferritin.

Steve G Wong, Jason C Grigg, Nick E Le Brun, Geoffrey R Moore, Michael E P Murphy, A Grant Mauk

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 29 citations in OpenAlex.

  1. The assembly rules guiding hetero-oligomeric bacterioferritin organization and their evolutionary signature.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Review
  4. Morphological difference of Escherichia coli non-heme ferritin iron cores reconstituted in the presence and absence of inorganic phosphate.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2022
    Article
  5. Review
  6. Article
  7. Bacterial iron detoxification at the molecular level.The Journal of biological chemistry · 2020
    Review
  8. Serendipitous crystallization and structure determination of bacterioferritin from Achromobacter.Acta crystallographica. Section F, Structural biology communications · 2018
    Article
  9. Article
  10. Article
  11. Ferritins: furnishing proteins with iron.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2016
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Fe(2+) substrate transport through ferritin protein cage ion channels influences enzyme activity and biomineralization.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Steve G WongFrom the Department of Biochemistry and Molecular Biology, the Centre for Blood Research and.
Jason C GriggDepartment of Microbiology and Immunology, University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada and.
Nick E Le BrunCentre for Molecular and Structural Biochemistry, School of Chemistry, University of East Anglia, Norwich NR4 7TJ, United Kingdom.
Geoffrey R MooreCentre for Molecular and Structural Biochemistry, School of Chemistry, University of East Anglia, Norwich NR4 7TJ, United Kingdom.
Michael E P MurphyDepartment of Microbiology and Immunology, University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada and.
A Grant MaukFrom the Department of Biochemistry and Molecular Biology, the Centre for Blood Research and grant.mauk@ubc.ca.
University of British Columbia · CAUniversity of East Anglia · GB

Funding

Biotechnology and Biological Sciences Research Council 83/B14704Biotechnology and Biological Sciences Research Council BB/D001943/1
6 · The paper itself

Abstract

Bacterioferritin is a bacterial iron storage and detoxification protein that is capable of forming a ferric oxyhydroxide mineral core within its central cavity. To do this, iron must traverse the bacterioferritin protein shell, which is expected to occur through one or more of the channels through the shell identified by structural studies. The size and negative electrostatic potential of the 24 B-type channels suggest that they could provide a route for iron into bacterioferritin. Residues at the B-type channel (Asn-34, Glu-66, Asp-132, and Asp-139) of E. coli bacterioferritin were substituted to determine if they are important for iron core formation. A significant decrease in the rates of initial oxidation of Fe(II) at the ferroxidase center and subsequent iron mineralization was observed for the D132F variant. The crystal structure of this variant shows that substitution of residue 132 with phenylalanine caused a steric blockage of the B-type channel and no other material structural perturbation. We conclude that the B-type channel is a major route for iron entry into both the ferroxidase center and the iron storage cavity of bacterioferritin.

Indexed as

Amino Acid SequenceBinding SitesEscherichia coliEscherichia coli ProteinsIronMetalloproteinsMolecular Docking SimulationMolecular Sequence DataOxidation-ReductionPoint MutationStatic Electricitybfr protein, E coliEscherichia coli ProteinsIronMetalloproteinsBacterioferritin, Iron Storage, Iron CoreEscherichia coli (E. coli)FerritinIronSite-directed MutagenesisX-ray Crystallography

Identifiers

PMID25512375
PMCPMC4319037
OpenAlexW2052728518

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.