Evidence map›Paper›PMID 25511740›Full record

ArticleCancer letters2015

Identification of epidermal growth factor receptor (EGFR) genetic variants that modify risk for head and neck squamous cell carcinoma.

Christopher Fung, Pei Zhou, Sonali Joyce, Kerry Trent, Jian-Min Yuan, Jennifer R Grandis, Joel L Weissfeld, Marjorie Romkes, Daniel E Weeks, Ann Marie Egloff

Abstract read
In one paragraph

Article in Cancer letters, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Article
  3. International journal of molecular sciences · 2022
    Review
  4. Article
  5. Article
  6. Article
  7. Association between EGFR polymorphisms and the risk of lung cancer.International journal of clinical and experimental pathology · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Christopher FungDepartment of Otolaryngology, University of Pittsburgh, Pittsburgh, PA, USA.
Pei ZhouDepartment of Otolaryngology, University of Pittsburgh, Pittsburgh, PA, USA.
Sonali JoyceDepartment of Otolaryngology, University of Pittsburgh, Pittsburgh, PA, USA.
Kerry TrentDepartment of Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.
Jian-Min YuanDepartment of Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.
Jennifer R GrandisDepartment of Otolaryngology, University of Pittsburgh, Pittsburgh, PA, USA; Department of Pharmacology & Chemical Biology, University of Pittsburgh, Pittsburgh, PA, USA.
Joel L WeissfeldDepartment of Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA.
Marjorie RomkesDepartment of Medicine, University of Pittsburgh, Pittsburgh, PA, USA.
Daniel E WeeksDepartment of Human Genetics and Biostatistics, University of Pittsburgh, Pittsburgh, PA, USA.
Ann Marie EgloffDepartment of Otolaryngology, University of Pittsburgh, Pittsburgh, PA, USA; Department of Microbiology and Molecular Genetics, University of Pittsburgh, Pittsburgh, PA, USA. Electronic address: egloffam@upmc.edu.
University of Pittsburgh · US

Funding

UNIVERSITY OF PITTSBURGH CLINICAL AND TRANSLATIONAL SCIENCE INSTITUTE: BPCAUL1RR024153 · NCRR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2006 to 2011
$73.9M
University of Pittsburgh Clinical and Translational Science InstituteUL1TR000005 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2012 to 2015
$50.8M
WILD TYPE P53-BASED ADJUVANT IMMUNOTHERAPY FOR SCCHNP50CA097190 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CHRISTOPHER J. BAKKENIST · 2004 to 2026
$49.6M
Genomic and Proteomic Biomarkers for Head and Neck Cancer Risk and PrognosisK07CA137140 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI EGLOFF, ANN MARIE · 2009 to 2013
$519k
Howard Hughes Medical InstituteNCATS NIH HHS UL1 TR000005NCI NIH HHS K07 CA137140NCI NIH HHS K07CA137140NCI NIH HHS P50 CA097190NCI NIH HHS P50CA097190NCRR NIH HHS UL1 RR024153
6 · The paper itself

Abstract

EGFR polymorphisms have not been thoroughly evaluated for association with head and neck squamous cell carcinoma (HNSCC) risk. We genotyped 578 HNSCC patients and 588 cancer-free controls for 60 EGFR single nucleotide polymorphisms (SNPs) and tested associations with HNSCC risk. EGFR intronic SNPs rs12535536, rs2075110, rs1253871, rs845561 and rs6970262 and synonymous SNP rs2072454 were associated with HNSCC risk among all subjects (p < 0.05). SNPs rs12538371, rs845561, and rs6970262 were significantly associated with HNSCC risk (p < 0.05) among never tobacco users. We identified EGFR variants that likely modify risk for HNSCC including three variants that contribute to tobacco-independent risk.

Indexed as

Polymorphism, Single NucleotideAdultAgedAged, 80 and overCarcinoma, Squamous CellCase-Control StudiesCell Line, TumorErbB ReceptorsFemaleGene FrequencyGenetic Predisposition to DiseaseGenotypeHead and Neck NeoplasmsHumansIntronsLinkage DisequilibriumErbB ReceptorsCase–control studyGenetic polymorphismHead and neck cancer riskNonsmokerTobacco-independent

Identifiers

PMID25511740
PMCPMC4295492
OpenAlexW2152397294

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.