Evidence map›Paper›PMID 25511710›Full record

ArticleBMC plant biology2014

The AtRAD21.1 and AtRAD21.3 Arabidopsis cohesins play a synergistic role in somatic DNA double strand break damage repair.

José A da Costa-Nunes, Cláudio Capitão, Jaroslav Kozak, Pedro Costa-Nunes, Gloria M Ducasa, Olga Pontes, Karel J Angelis

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

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  9. Alternative FunctionalFrontiers in microbiology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 4 countries.

José A da Costa-Nunes
Cláudio Capitão
Jaroslav Kozak
Pedro Costa-Nunes
Gloria M Ducasa
Olga Pontes
Karel J Angelis
University of New Mexico · USCzech Academy of Sciences, Institute of Experimental Botany · CZInstituto Português Da Qualidade · PTUniversidade Nova de Lisboa · PT

Funding

UNM PREP (Post-baccalaureate Research Education ProgramR25GM075149 · NIGMS · UNIVERSITY OF NEW MEXICO · PI Kelly Miller · 2005 to 2026
$7.3M
NIGMS NIH HHS R25 GM075149
6 · The paper itself

Abstract

backgroundThe RAD21 cohesin plays, besides its well-recognised role in chromatid cohesion, a role in DNA double strand break (dsb) repair. In Arabidopsis there are three RAD21 paralog genes (AtRAD21.1, AtRAD21.2 and AtRAD21.3), yet only AtRAD21.1 has been shown to be required for DNA dsb damage repair. Further investigation of the role of cohesins in DNA dsb repair was carried out and is here reported.

resultsWe show for the first time that not only AtRAD21.1 but also AtRAD21.3 play a role in somatic DNA dsb repair. Comet data shows that the lack of either cohesins induces a similar high basal level of DNA dsb in the nuclei and a slower DNA dsb repair kinetics in both cohesin mutants. The observed AtRAD21.3 transcriptional response to DNA dsb induction reinforces further the role of this cohesin in DNA dsb repair. The importance of AtRAD21.3 in DNA dsb damage repair, after exposure to DNA dsb damage inducing agents, is notorious and recognisably evident at the phenotypical level, particularly when the AtRAD21.1 gene is also disrupted.

conclusionsOur data demonstrates that both Arabidopsis cohesin (AtRAD21.1 and AtRAD21.3) play a role in somatic DNA dsb repair. Furthermore, the phenotypical data from the atrad21.1 atrad21.3 double mutant indicates that these two cohesins function synergistically in DNA dsb repair. The implications of this data are discussed.

Indexed as

DNA Breaks, Double-StrandedArabidopsisArabidopsis ProteinsChromosomal Proteins, Non-HistoneDNA, PlantDNA RepairReal-Time Polymerase Chain ReactionArabidopsis ProteinsChromosomal Proteins, Non-HistoneDNA, PlantRAD21.2 protein, ArabidopsisRAD21.3 protein, Arabidopsis

Identifiers

PMID25511710
PMCPMC4273318
OpenAlexW2159651492

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.