Evidence map›Paper›PMID 25506037›Full record

ArticleInternational journal of evolutionary biology2014

A syntenic region conserved from fish to Mammalian x chromosome.

Guijun Guan, Meisheng Yi, Tohru Kobayashi, Yunhan Hong, Yoshitaka Nagahama

Open access · hybridAbstract read
In one paragraph

Article in International journal of evolutionary biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 3 countries.

Guijun GuanKey Laboratory of Exploration and Utilization of Aquatic Genetic Resources, College of Fisheries and Life Sciences, Shanghai Ocean University and Laboratory of Reproductive Biology, Ministry of Education, Huchenghuan Road 999, Shanghai 201306, China ; Laboratory of Reproduction, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan.
Meisheng YiLaboratory of Reproduction, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan ; Laboratory of Molecular Reproductive Biology, School of Marine Sciences, Sun Yat-sen University, 135 Xingang West Road, Guangzhou, China.
Tohru KobayashiLaboratory of Reproduction, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan ; Lab of Molecular Developmental Biology, Institute for Environmental Sciences, University of Shizuoka, Yada, Shizuoka 422-8526, Japan.
Yunhan HongDepartment of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543.
Yoshitaka NagahamaLaboratory of Reproduction, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan ; South Ehime Fisheries Research Center, Institution for Collaborative Relations, Ehime University, 3 Bunkyo-cho, Matsuyama 790-8577, Japan.
National Institute for Basic Biology · JPEhime University · JPNational University of Singapore · SGShanghai Ocean University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sex chromosomes bearing the sex-determining gene initiate development along the male or female pathway, no matter which sex is determined by XY male or ZW female heterogamety. Sex chromosomes originate from ancient autosomes but evolved rapidly after the acquisition of sex-determining factors which are highly divergent between species. In the heterogametic male system (XY system), the X chromosome is relatively evolutionary silent and maintains most of its ancestral genes, in contrast to its Y counterpart that has evolved rapidly and degenerated. Sex in a teleost fish, the Nile tilapia (Oreochromis niloticus), is determined genetically via an XY system, in which an unpaired region is present in the largest chromosome pair. We defined the differences in DNA contents present in this chromosome with a two-color comparative genomic hybridization (CGH) and the random amplified polymorphic DNA (RAPD) approach in XY males. We further identified a syntenic segment within this region that is well conserved in several teleosts. Through comparative genome analysis, this syntenic segment was also shown to be present in mammalian X chromosomes, suggesting a common ancestral origin of vertebrate sex chromosomes.

Identifiers

PMID25506037
PMCPMC4254068
OpenAlexW2135563164

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.