Evidence map›Paper›PMID 25505656›Full record

ArticleIn silico pharmacology2013

Inhibition of VEGF: a novel mechanism to control angiogenesis by Withania somnifera's key metabolite Withaferin A.

Sanjib Saha, Md Khirul Islam, Jamil A Shilpi, Shihab Hasan

Open access · hybridAbstract read
In one paragraph

Article in In silico pharmacology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
13.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 55 citations in OpenAlex.

  1. Review
  2. Article
  3. Anti-inflammatory and anti-angiogenic effects ofJournal of medicine and life · 2024
    Article
  4. Can Ashwagandha Benefit the Endocrine System?-A Review.International journal of molecular sciences · 2023
    Review
  5. Review
  6. Review
  7. Review
  8. Frontiers in pharmacology · 2021
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Withania somnifera: From prevention to treatment of cancer.Molecular nutrition & food research · 2016
    Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 3 countries.

Sanjib SahaPharmacy Discipline, Life Science School, Khulna University, Khulna, 9208 Bangladesh.
Md Khirul IslamPharmacy Discipline, Life Science School, Khulna University, Khulna, 9208 Bangladesh.
Jamil A ShilpiPharmacy Discipline, Life Science School, Khulna University, Khulna, 9208 Bangladesh ; Centre for Natural Products and Drug (CENAR), University of Malaya, 50603 Kuala Lumpur, Malaysia.
Shihab HasanSchool of Medicine, The University of Queensland (UQ), Brisbane, Queensland Australia ; Bioinformatics Lab, Queensland Institute of Medical Research (QIMR), Brisbane, Queensland Australia.
Khulna University · BDUniversity of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeAngiogenesis, or new blood vessel formation from existing one, plays both beneficial and detrimental roles in living organisms in different aspects. Vascular endothelial growth factor (VEGF), a signal protein, well established as key regulator of vasculogenesis and angiogenesis. VEGF ensures oxygen supply to the tissues when blood supply is not adequate, or tissue environment is in hypoxic condition. Limited expression of VEGF is necessary, but if it is over expressed, then it can lead to serious disease like cancer. Cancers that have ability to express VEGF are more efficient to grow and metastasize because solid cancers cannot grow larger than a limited size without adequate blood and oxygen supply. Anti-VEGF drugs are already available in the market to control angiogenesis, but they are often associated with severe side-effects like fetal bleeding and proteinuria in the large number of patients. To avoid such side-effects, new insight is required to find potential compounds as anti-VEGF from natural sources. In the present investigation, molecular docking studies were carried out to find the potentiality of Withaferin A, a key metabolite of Withania somnifera, as an inhibitor of VEGF.

methodsMolecular Docking studies were performed in DockingServer and SwissDock. Bevacizumab, a commercial anti-VEGF drug, was used as reference to compare the activity of Withaferin A. X-ray crystallographic structure of VEGF, was retrieved from Protein Data Bank (PDB), and used as drug target protein. Structure of Withaferin A and Bevacizumab was obtained from PubChem and ZINC databases. Molecular visualization was performed using UCSF Chimera.

resultsWithaferin A showed favorable binding with VEGF with low binding energy in comparison to Bevacizumab. Molecular Docking studies also revealed potential protein-ligand interactions for both Withaferin A and Bevacizumab.

conclusionsConclusively our results strongly suggest that Withaferin A is a potent anti-VEGF agent as ascertained by its potential interaction with VEGF. This scientific hypothesis might provide a better insight to control angiogenesis as well as to control solid cancer growth and metastasis.

Indexed as

AngiogenesisBevacizumabChimeraDockingServerSwissDockVEGFWithaferin AWithania somnifera

Identifiers

PMID25505656
PMCPMC4230651
OpenAlexW2109633941

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.