Evidence map›Paper›PMID 25505245›Full record

ArticleThe Journal of biological chemistry2015

Analysis of mucolipidosis II/III GNPTAB missense mutations identifies domains of UDP-GlcNAc:lysosomal enzyme GlcNAc-1-phosphotransferase involved in catalytic function and lysosomal enzyme recognition.

Yi Qian, Eline van Meel, Heather Flanagan-Steet, Alex Yox, Richard Steet, Stuart Kornfeld

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Zebra-Sphinx: Modeling Sphingolipidoses in Zebrafish.International journal of molecular sciences · 2023
    Review
  5. Article
  6. Article
  7. Structures of the mannose-6-phosphate pathway enzyme, GlcNAc-1-phosphotransferase.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  8. Article
  9. Article
  10. Mucolipidoses Overview: Past, Present, and Future.International journal of molecular sciences · 2020
    Review
  11. Article
  12. Article
  13. Modeling Lysosomal Storage Diseases in the Zebrafish.Frontiers in molecular biosciences · 2020
    Review
  14. Article
  15. Article
  16. Compound heterozygousInternational journal of clinical and experimental pathology · 2019
    Article
  17. Recycling of Golgi glycosyltransferases requires direct binding to coatomer.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yi QianFrom the Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri 63110 and.
Eline van MeelFrom the Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri 63110 and.
Heather Flanagan-SteetComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602.
Alex YoxComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602.
Richard SteetComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602 rsteet@ccrc.uga.edu.
Stuart KornfeldFrom the Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri 63110 and.
Washington University in St. Louis · USUniversity of Georgia · US

Funding

STRUCTURE, BIOSYNTHESIS &FUNCTION OF GLYCOPROTEINSR37CA008759 · NCI · WASHINGTON UNIVERSITY · PI KORNFELD, STUART A · 1990 to 2018
$14.0M
PATHOGENIC MECHANISMS OF LYSOSOMAL DISEASER01GM086524 · NIGMS · UNIVERSITY OF GEORGIA · PI STEET, RICHARD · 2009 to 2021
$4.0M
Structure, Biosynthesis & Function of GlycoproteinsR01CA008759 · NCI · WASHINGTON UNIVERSITY · PI KORNFELD, STUART A · 1985 to 2023
$3.5M
NCI NIH HHS CA-008759NCI NIH HHS R37 CA008759NIGMS NIH HHS GM-086524-7NIGMS NIH HHS R01 GM086524
6 · The paper itself

Abstract

UDP-GlcNAc:lysosomal enzyme GlcNAc-1-phosphotransferase tags newly synthesized lysosomal enzymes with mannose 6-phosphate recognition markers, which are required for their targeting to the endolysosomal system. GNPTAB encodes the α and β subunits of GlcNAc-1-phosphotransferase, and mutations in this gene cause the lysosomal storage disorders mucolipidosis II and III αβ. Prior investigation of missense mutations in GNPTAB uncovered amino acids in the N-terminal region and within the DMAP domain involved in Golgi retention of GlcNAc-1-phosphotransferase and its ability to specifically recognize lysosomal hydrolases, respectively. Here, we undertook a comprehensive analysis of the remaining missense mutations in GNPTAB reported in mucolipidosis II and III αβ patients using cell- and zebrafish-based approaches. We show that the Stealth domain harbors the catalytic site, as some mutations in these regions greatly impaired the activity of the enzyme without affecting its Golgi localization and proteolytic processing. We also demonstrate a role for the Notch repeat 1 in lysosomal hydrolase recognition, as missense mutations in conserved cysteine residues in this domain do not affect the catalytic activity but impair mannose phosphorylation of certain lysosomal hydrolases. Rescue experiments using mRNA bearing Notch repeat 1 mutations in GNPTAB-deficient zebrafish revealed selective effects on hydrolase recognition that differ from the DMAP mutation. Finally, the mutant R587P, located in the spacer between Notch 2 and DMAP, was partially rescued by overexpression of the γ subunit, suggesting a role for this region in γ subunit binding. These studies provide new insight into the functions of the different domains of the α and β subunits.

Indexed as

AnimalsHumansLysosomesMucolipidosesMutation, MissenseTransferases (Other Substituted Phosphate Groups)ZebrafishGNPTAB protein, humanTransferases (Other Substituted Phosphate Groups)EnzymeGenetic DiseaseGlcNAc-1-phosphotransferaseGolgiLysosomal Storage DiseaseMannose 6-phosphateMucolipidosis IIMucolipidosis III αβNotch DomainsZebrafish

Identifiers

PMID25505245
PMCPMC4317033
OpenAlexW2081203092

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.