Evidence map›Paper›PMID 25503798›Full record

ArticlePLoS pathogens2014

Proteomic analysis of the acidocalcisome, an organelle conserved from bacteria to human cells.

Guozhong Huang, Paul N Ulrich, Melissa Storey, Darryl Johnson, Julie Tischer, Javier A Tovar, Silvia N J Moreno, Ron Orlando, Roberto Docampo

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 94 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Iron transport pathways in the human malaria parasiteFrontiers in cellular and infection microbiology · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. New insights into the role of acidocalcisomes in trypanosomatids.The Journal of eukaryotic microbiology · 2022
    Review
  16. Polyamine Metabolism inMedical sciences (Basel, Switzerland) · 2022
    Review
  17. Updated List of Transport Proteins inFrontiers in cellular and infection microbiology · 2022
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Guozhong HuangCenter for Tropical and Emerging Global Diseases and Department of Cellular Biology, University of Georgia, Athens, Georgia, United States of America.
Paul N UlrichDepartment of Biology, Georgia State University, Atlanta, Georgia, United States of America.
Melissa StoreyCenter for Tropical and Emerging Global Diseases and Department of Cellular Biology, University of Georgia, Athens, Georgia, United States of America.
Darryl JohnsonComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States of America.
Julie TischerCenter for Tropical and Emerging Global Diseases and Department of Cellular Biology, University of Georgia, Athens, Georgia, United States of America.
Javier A TovarDepartment of Biology, Georgia State University, Atlanta, Georgia, United States of America.
Silvia N J MorenoCenter for Tropical and Emerging Global Diseases and Department of Cellular Biology, University of Georgia, Athens, Georgia, United States of America.
Ron OrlandoComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States of America.
Roberto DocampoCenter for Tropical and Emerging Global Diseases and Department of Cellular Biology, University of Georgia, Athens, Georgia, United States of America.
University of Georgia · USGeorgia State University · US

Funding

The roles of polyphosphate and acidocalcisomes in Trypanosoma bruceiR01AI077538 · NIAID · UNIVERSITY OF GEORGIA · PI DOCAMPO, ROBERTO · 2009 to 2019
$3.8M
NIAID NIH HHS AI077538NIAID NIH HHS R01 AI077538
6 · The paper itself

Abstract

Acidocalcisomes are acidic organelles present in a diverse range of organisms from bacteria to human cells. In this study acidocalcisomes were purified from the model organism Trypanosoma brucei, and their protein composition was determined by mass spectrometry. The results, along with those that we previously reported, show that acidocalcisomes are rich in pumps and transporters, involved in phosphate and cation homeostasis, and calcium signaling. We validated the acidocalcisome localization of seven new, putative, acidocalcisome proteins (phosphate transporter, vacuolar H+-ATPase subunits a and d, vacuolar iron transporter, zinc transporter, polyamine transporter, and acid phosphatase), confirmed the presence of six previously characterized acidocalcisome proteins, and validated the localization of five novel proteins to different subcellular compartments by expressing them fused to epitope tags in their endogenous loci or by immunofluorescence microscopy with specific antibodies. Knockdown of several newly identified acidocalcisome proteins by RNA interference (RNAi) revealed that they are essential for the survival of the parasites. These results provide a comprehensive insight into the unique composition of acidocalcisomes of T. brucei, an important eukaryotic pathogen, and direct evidence that acidocalcisomes are especially adapted for the accumulation of polyphosphate.

Indexed as

ProteomicsAnimalsCalcium SignalingCationsCells, CulturedHomeostasisMass SpectrometryMembrane Transport ProteinsOrganellesPhosphatesProtozoan ProteinsTrypanosoma brucei bruceiCationsMembrane Transport ProteinsPhosphatesProtozoan Proteins

Identifiers

PMID25503798
PMCPMC4263762
OpenAlexW2057833233

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.