Evidence map›Paper›PMID 25503407›Full record

ArticleDevelopment (Cambridge, England)2015

UPF2, a nonsense-mediated mRNA decay factor, is required for prepubertal Sertoli cell development and male fertility by ensuring fidelity of the transcriptome.

Jianqiang Bao, Chong Tang, Shuiqiao Yuan, Bo T Porse, Wei Yan

Abstract read
In one paragraph

Article in Development (Cambridge, England), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jianqiang BaoDepartment of Physiology and Cell Biology, University of Nevada School of Medicine, 1664 North Virginia Street, MS575, Reno, NV 89557, USA JianqiangBao@gmail.com wyan@medicine.nevada.edu.
Chong TangDepartment of Physiology and Cell Biology, University of Nevada School of Medicine, 1664 North Virginia Street, MS575, Reno, NV 89557, USA.
Shuiqiao YuanDepartment of Physiology and Cell Biology, University of Nevada School of Medicine, 1664 North Virginia Street, MS575, Reno, NV 89557, USA.
Bo T PorseThe Finsen Laboratory, Rigshospitalet, Faculty of Health Sciences, University of Copenhagen, Jagtvej 124, Copenhagen, DK-2200, Denmark Biotech Research and Innovation Centre (BRIC), University of Copenhagen, Jagtvej 124, Copenhagen, DK-2200, Denmark Danish Stem Cell Centre (DanStem), Faculty of Health Sciences, University of Copenhagen, Ole Maaløes Vej 5, Copenhagen N DK2200, Denmark.
Wei YanDepartment of Physiology and Cell Biology, University of Nevada School of Medicine, 1664 North Virginia Street, MS575, Reno, NV 89557, USA JianqiangBao@gmail.com wyan@medicine.nevada.edu.

Funding

STRETCH DEPENDENT POTASSIUM CHANNEL REGULATION IN OVERACTIVE BLADDERP20RR018751 · NCRR · UNIVERSITY OF NEVADA RENO · PI RO, SEUNGIL · 2003 to 2011
$17.3M
Regulation of Spermatogenesis by X-linked miRNAsR01HD060858 · NICHD · UNIVERSITY OF NEVADA RENO · PI MCCARREY, JOHN R, YAN, WEI · 2010 to 2014
$2.0M
Are sperm-borne small RNAs important?R21HD071736 · NICHD · UNIVERSITY OF NEVADA RENO · PI YAN, WEI · 2012 to 2013
$380k
Regulation of Leydig cell function by small noncoding RNAsR03HD074573 · NICHD · UNIVERSITY OF NEVADA RENO · PI YAN, WEI · 2013 to 2014
$139k
NCRR NIH HHS P20 RR018751NCRR NIH HHS RR18751NICHD NIH HHS HD060858NICHD NIH HHS HD071736NICHD NIH HHS HD074573NICHD NIH HHS R01 HD060858NICHD NIH HHS R03 HD074573NICHD NIH HHS R21 HD071736
6 · The paper itself

Abstract

Nonsense-mediated mRNA decay (NMD) represents a highly conserved RNA surveillance mechanism through which mRNA transcripts bearing premature termination codons (PTCs) are selectively degraded to maintain transcriptomic fidelity in the cell. Numerous in vitro studies have demonstrated the importance of the NMD pathway; however, evidence supporting its physiological necessity has only just started to emerge. Here, we report that ablation of Upf2, which encodes a core NMD factor, in murine embryonic Sertoli cells (SCs) leads to severe testicular atrophy and male sterility owing to rapid depletion of both SCs and germ cells during prepubertal testicular development. RNA-Seq and bioinformatic analyses revealed impaired transcriptomic homeostasis in SC-specific Upf2 knockout testes, characterized by an accumulation of PTC-containing transcripts and the transcriptome-wide dysregulation of genes encoding splicing factors and key proteins essential for SC fate control. Our data demonstrate an essential role of UPF2-mediated NMD in prepubertal SC development and male fertility.

Indexed as

AnimalsBase SequenceCarrier ProteinsComputational BiologyCrosses, GeneticFertilityGene Knockout TechniquesMaleMiceMicroscopy, FluorescenceMolecular Sequence DataNonsense Mediated mRNA DecayReal-Time Polymerase Chain ReactionRNA-Binding ProteinsSequence Analysis, RNASertoli CellsCarrier ProteinsRNA-Binding ProteinsUpf2 protein, mouse3′UTR shorteningAlternative splicingGonocyteMouseNonsense-mediated mRNA decayPremature termination codonRNA-SeqSertoli cellSpermatogenesisSterilityTestis

Identifiers

PMID25503407
PMCPMC4302838

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.