Evidence map›Paper›PMID 25503069›Full record

ArticlePloS one2014

Autophagic marker MAP1LC3B expression levels are associated with carotid atherosclerosis symptomatology.

Bhairavi Swaminathan, Haize Goikuria, Reyes Vega, Alfredo Rodríguez-Antigüedad, Antonio López Medina, María del Mar Freijo, Koen Vandenbroeck, Iraide Alloza

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Polymorphism of IL-12/IL-23 axis is associated with coronary heart disease.Journal of cellular and molecular medicine · 2024
    Article
  5. Article
  6. Article
  7. Mitochondrial quality control in health and cardiovascular diseases.Frontiers in cell and developmental biology · 2023
    Review
  8. Review
  9. Article
  10. miR-451-3p alleviates myocardial ischemia/reperfusion injury by inhibiting MAP1LC3B-mediated autophagy.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2021
    Article
  11. Article
  12. Autophagy-Related Genes in Atherosclerosis.Journal of healthcare engineering · 2021
    Article
  13. Review
  14. Review
  15. International journal of molecular sciences · 2020
    Article
  16. Review
  17. Review
  18. Mitophagy in Cardiovascular Diseases.Journal of clinical medicine · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Bhairavi SwaminathanNeurogenomiks, Neurosciences Department, Faculty of Medicine and Odontology, University of Basque Country, Leioa, Spain.
Haize GoikuriaNeurogenomiks, Neurosciences Department, Faculty of Medicine and Odontology, University of Basque Country, Leioa, Spain; Achucarro Basque Center for Neurosciences, Zamudio, Spain.
Reyes VegaDepartment of Neurology, Basurto Hospital, Bilbao, Spain.
Alfredo Rodríguez-AntigüedadDepartment of Neurology, Basurto Hospital, Bilbao, Spain.
Antonio López MedinaDepartment of Neurology, Basurto Hospital, Bilbao, Spain.
María del Mar FreijoDepartment of Neurology, Basurto Hospital, Bilbao, Spain.
Koen VandenbroeckNeurogenomiks, Neurosciences Department, Faculty of Medicine and Odontology, University of Basque Country, Leioa, Spain; IKERBASQUE, Basque Foundation for Sciences, Bilbao, Spain; Achucarro Basque Center for Neurosciences, Zamudio, Spain.
Iraide AllozaNeurogenomiks, Neurosciences Department, Faculty of Medicine and Odontology, University of Basque Country, Leioa, Spain; IKERBASQUE, Basque Foundation for Sciences, Bilbao, Spain; Achucarro Basque Center for Neurosciences, Zamudio, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesThe mechanism by which atheroma plaque becomes unstable is not completely understood to date but analysis of differentially expressed genes in stable versus unstable plaques may provide clues. This will be crucial toward disclosing the mechanistic basis of plaque instability, and may help to identify prognostic biomarkers for ischaemic events. The objective of our study was to identify differences in expression levels of 59 selected genes between symptomatic patients (unstable plaques) and asymptomatic patients (stable plaques).

methods80 carotid plaques obtained by carotid endarterectomy and classified as symptomatic (>70% stenosis) or asymptomatic (>80% stenosis) were used in this study. The expression levels of 59 genes were quantified by qPCR on RNA extracted from the carotid plaques obtained by endarterectomy and analyzed by means of various bioinformatic tools.

resultsSeveral genes associated with autophagy pathways displayed differential expression levels between asymptomatic and symptomatic (i.e. MAP1LC3B, RAB24, EVA1A). In particular, mRNA levels of MAP1LC3B, an autophagic marker, showed a 5-fold decrease in symptomatic samples, which was confirmed in protein blots. Immune system-related factors and endoplasmic reticulum-associated markers (i.e. ERP27, ITPR1, ERO1LB, TIMP1, IL12B) emerged as differently expressed genes between asymptomatic and symptomatic patients.

conclusionsCarotid atherosclerotic plaques in which MAP1LC3B is underexpressed would not be able to benefit from MAP1LC3B-associated autophagy. This may lead to accumulation of dead cells at lesion site with subsequent plaque destabilization leading to cerebrovascular events. Identified biomarkers and network interactions may represent novel targets for development of treatments against plaque destabilization and thus for the prevention of cerebrovascular events.

Indexed as

AgedAutophagyBiomarkersCarotid Artery DiseasesCarotid StenosisFemaleGene ExpressionGenetic Association StudiesHumansMaleMicrotubule-Associated ProteinsPlaque, AtheroscleroticBiomarkersMAP1LC3B protein, humanMicrotubule-Associated Proteins

Identifiers

PMID25503069
PMCPMC4264866

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.