Evidence map›Paper›PMID 25501811›Full record

ArticleJournal of cell science2015

The dynamic conformational landscape of gamma-secretase.

Nadav Elad, Bart De Strooper, Sam Lismont, Wim Hagen, Sarah Veugelen, Muriel Arimon, Katrien Horré, Oksana Berezovska, Carsten Sachse, Lucía Chávez-Gutiérrez

Open access · hybridAbstract read
In one paragraph

Article in Journal of cell science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. The Intricate Notch Signaling Dynamics in Therapeutic Realms of Cancer.ACS pharmacology & translational science · 2023
    Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Biomolecules · 2020
    Article
  11. Article
  12. Article
  13. Conformational Dynamics of Transmembrane Domain 3 of Presenilin 1 Is Associated with the Trimming Activity of γ-Secretase.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2019
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Nadav Elad
Bart De Strooper
Sam Lismont
Wim Hagen
Sarah Veugelen
Muriel Arimon
Katrien Horré
Oksana Berezovska
Carsten Sachse
Lucía Chávez-Gutiérrez
VIB-KU Leuven Center for Cancer Biology · BEEuropean Molecular Biology Laboratory · DEHarvard University · USNational Hospital for Neurology and Neurosurgery · GBVIB-KU Leuven Center for Brain & Disease Research · BE

Funding

TRANSGENICS AND PRESENILIN FUNCTIONP01AG015379 · NIA · BRIGHAM AND WOMEN'S HOSPITAL · PI BEREZOVSKA, OKSANA, SELKOE, DENNIS J · 1998 to 2023
$51.3M
NIA NIH HHS AG15379NIA NIH HHS P01 AG015379
6 · The paper itself

Abstract

The structure and function of the gamma-secretase proteases are of great interest because of their crucial roles in cellular and disease processes. We established a novel purification protocol for the gamma-secretase complex that involves a conformation- and complex-specific nanobody, yielding highly pure and active enzyme. Using single particle electron microscopy, we analyzed the gamma-secretase structure and its conformational variability. Under steady-state conditions, the complex adopts three major conformations, which differ in overall compactness and relative position of the nicastrin ectodomain. Occupancy of the active or substrate-binding sites by inhibitors differentially stabilizes subpopulations of particles with compact conformations, whereas a mutation linked to familial Alzheimer disease results in enrichment of extended-conformation complexes with increased flexibility. Our study presents the csecretase complex as a dynamic population of interconverting conformations, involving rearrangements at the nanometer scale and a high level of structural interdependence between subunits. The fact that protease inhibition or clinical mutations, which affect amyloid beta (Abeta) generation, enrich for particular subpopulations of conformers indicates the functional relevance of the observed dynamic changes, which are likely to be instrumental for highly allosteric behavior of the enzyme.

Indexed as

Alzheimer DiseaseAmyloid Precursor Protein SecretasesAnimalsCatalytic DomainCell LineFlavin-Adenine DinucleotideHEK293 CellsHumansInsectaMembrane GlycoproteinsMicroscopy, ElectronProtein ConformationProtein SubunitsAmyloid Precursor Protein SecretasesFlavin-Adenine DinucleotideMembrane GlycoproteinsProtein Subunits

Identifiers

PMID25501811
PMCPMC4311135
OpenAlexW2323386724

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.