Evidence map›Paper›PMID 25499885›Full record

ArticleExperimental cell research2015

Phosphorylation and cellular function of the human Rpa2 N-terminus in the budding yeast Saccharomyces cerevisiae.

Padmaja L Ghospurkar, Timothy M Wilson, Shengqin Liu, Anna Herauf, Jenna Steffes, Erica N Mueller, Gregory G Oakley, Stuart J Haring

Open access · hybridAbstract read
In one paragraph

Article in Experimental cell research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Padmaja L GhospurkarDepartment of Chemistry and Biochemistry, North Dakota State University, Fargo, ND 58108, USA.
Timothy M WilsonDepartment of Chemistry and Biochemistry, North Dakota State University, Fargo, ND 58108, USA.
Shengqin LiuDepartment of Oral Biology, University of Nebraska Medical Center, Lincoln, NE 68583, USA.
Anna HeraufDepartment of Chemistry and Biochemistry, North Dakota State University, Fargo, ND 58108, USA.
Jenna SteffesDepartment of Chemistry and Biochemistry, North Dakota State University, Fargo, ND 58108, USA.
Erica N MuellerDepartment of Chemistry and Biochemistry, North Dakota State University, Fargo, ND 58108, USA.
Gregory G OakleyDepartment of Oral Biology, University of Nebraska Medical Center, Lincoln, NE 68583, USA.
Stuart J HaringDepartment of Chemistry and Biochemistry, North Dakota State University, Fargo, ND 58108, USA; Interdisciplinary Cellular and Molecular Biology Program, North Dakota State University, Fargo, ND 58108, USA. Electronic address: stuart.haring@ndsu.edu.
North Dakota State University · USUniversity of Nebraska Medical Center · US

Funding

TARGETING AND DELIVERYP20RR015566 · NCRR · NORTH DAKOTA STATE UNIVERSITY · PI DORSAM, GLENN PAUL · 2001 to 2011
$19.0M
SUPPRESSIVE ROLE OF TGFBETA IN METASTASIS OF COLON CANCERP20RR018759 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI JOHNSON, KEITH R · 2003 to 2011
$17.9M
Pilot Projects: Core DP30GM103332 · NIGMS · NORTH DAKOTA STATE UNIVERSITY · PI SIBI, MUKUND P. · 2012 to 2016
$4.9M
Research Pilot Project ProgramP30GM106397 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI JOHNSON, KEITH R · 2013 to 2017
$4.9M
NCRR NIH HHS P20 RR015566NCRR NIH HHS P20RR015566NCRR NIH HHS P20 RR018759NCRR NIH HHS P20RR018759NIGMS NIH HHS P30 GM103332NIGMS NIH HHS P30 GM106397
6 · The paper itself

Abstract

Maintenance of genome integrity is critical for proper cell growth. This occurs through accurate DNA replication and repair of DNA lesions. A key factor involved in both DNA replication and the DNA damage response is the heterotrimeric single-stranded DNA (ssDNA) binding complex Replication Protein A (RPA). Although the RPA complex appears to be structurally conserved throughout eukaryotes, the primary amino acid sequence of each subunit can vary considerably. Examination of sequence differences along with the functional interchangeability of orthologous RPA subunits or regions could provide insight into important regions and their functions. This might also allow for study in simpler systems. We determined that substitution of yeast Replication Factor A (RFA) with human RPA does not support yeast cell viability. Exchange of a single yeast RFA subunit with the corresponding human RPA subunit does not function due to lack of inter-species subunit interactions. Substitution of yeast Rfa2 with domains/regions of human Rpa2 important for Rpa2 function (i.e., the N-terminus and the loop 3-4 region) supports viability in yeast cells, and hybrid proteins containing human Rpa2 N-terminal phospho-mutations result in similar DNA damage phenotypes to analogous yeast Rfa2 N-terminal phospho-mutants. Finally, the human Rpa2 N-terminus (NT) fused to yeast Rfa2 is phosphorylated in a manner similar to human Rpa2 in human cells, indicating that conserved kinases recognize the human domain in yeast. The implication is that budding yeast represents a potential model system for studying not only human Rpa2 N-terminal phosphorylation, but also phosphorylation of Rpa2 N-termini from other eukaryotic organisms.

Indexed as

DNA ReplicationBlotting, WesternCell ProliferationCells, CulturedHeLa CellsHumansMutationPhosphorylationProtein Structure, TertiaryReal-Time Polymerase Chain ReactionReplication Protein AReverse Transcriptase Polymerase Chain ReactionRNA, MessengerSaccharomyces cerevisiaeTwo-Hybrid System TechniquesReplication Protein ARNA, MessengerRPA2 protein, humanDNA damage responseN-terminusPhosphorylationRPA

Identifiers

PMID25499885
PMCPMC4334453
OpenAlexW2061723394

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.