Evidence map›Paper›PMID 25499854›Full record

ReviewFree radical biology & medicine2015

Protein thiyl radical reactions and product formation: a kinetic simulation.

Thomas Nauser, Willem H Koppenol, Christian Schöneich

Open access · greenAbstract readReview
In one paragraph

Review in Free radical biology & medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. HAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Radical Mediated RapidBiomolecules · 2022
    Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Protein oxidation and peroxidation.The Biochemical journal · 2016
    Review
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Thomas NauserInstitute of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland. Electronic address: nauser@inorg.chem.ethz.ch.
Willem H KoppenolInstitute of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland.
Christian SchöneichDepartment of Pharmaceutical Chemistry, The University of Kansas, Lawrence, KS 66047, USA. Electronic address: schoneic@ku.edu.
ETH Zurich · CHUniversity of Kansas · US

Funding

SARCOPENIA AND APOPTOSIS: ROLE OF SERCA AND BCL-2P01AG012993 · NIA · UNIVERSITY OF KANSAS LAWRENCE · PI MICHAELIS, ELIAS K · 1995 to 2012
$14.0M
NIA NIH HHS P01 AG012993NIA NIH HHS P01AG12993
6 · The paper itself

Abstract

Protein thiyl radicals are important intermediates generated in redox processes of thiols and disulfides. Thiyl radicals efficiently react with glutathione and ascorbate, and the common notion is that these reactions serve to eliminate thiyl radicals before they can enter potentially hazardous processes. However, over the past years increasing evidence has been provided for rather efficient intramolecular hydrogen transfer processes of thiyl radicals in proteins and peptides. Based on rate constants published for these processes, we have performed kinetic simulations of protein thiyl radical reactivity. Our simulations suggest that protein thiyl radicals enter intramolecular hydrogen transfer reactions to a significant extent even under physiologic conditions, i.e., in the presence of 30 µM oxygen, 1 mM ascorbate, and 10 mM glutathione. At lower concentrations of ascorbate and glutathione, frequently observed when tissue is exposed to oxidative stress, the extent of irreversible protein thiyl radical-dependent protein modification increases.

Indexed as

Amino AcidsAnimalsAscorbic AcidComputer SimulationDisulfidesFree RadicalsGlutathioneHumansHydrogenKineticsModels, ChemicalOxidation-ReductionOxygenProteinsSulfhydryl CompoundsThermodynamicsAmino AcidsAscorbic AcidDisulfidesFree RadicalsGlutathioneHydrogenOxygenProteinsSulfhydryl CompoundsCarbon-centered radicalsD-Amino acidsFree radicalsGlutathioneHydrogen atom transferThiyl radicals

Identifiers

PMID25499854
PMCPMC5118936
OpenAlexW1996504614

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.