Evidence map›Paper›PMID 25493330›Full record

ArticleNucleic acid therapeutics2015

Size unbiased representative enzymatically generated RNAi (SURER) library and application for RNAi therapeutic screens.

Tiejun Li, York Yuanyuan Zhu, Li Chen, Yuncheng Sun, Jian Yuan, Michael Graham, Peter French

Abstract read
In one paragraph

Article in Nucleic acid therapeutics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Tiejun Li1 Small RNA Technology and Application Institute, Nantong University , Nantong, China .
York Yuanyuan Zhu
Li Chen
Yuncheng Sun
Jian Yuan
Michael Graham
Peter French

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA interference (RNAi) libraries screens have become widely used for small RNA (sRNA) therapeutic targets development. However, conventional enzymatically libraries, typically prepared using the type 2 restriction enzyme MmeI, produce sRNAs between 18 and 20 bp, much shorter than the usual lengths of 19-23 bp. Here we develop a size unbiased representative enzymatically generated RNAi (SURER) library, which employs type 3 restriction modification enzyme EcoP15I to produce sRNAs ranging from 19 to 23 bp using a group of rationally designed linkers, which can completely mimic the length of sRNAs naturally generated by Dicer enzyme in living cells, and the screening results of SURER libraries showed high recombination rate and knockdown efficiency. SURER library provides a useful tool for RNAi therapeutics screening in a fast and simple way.

Indexed as

Gene Knockdown TechniquesRNA InterferenceBase SequenceBiocatalysisDNA-Directed DNA PolymeraseGene ExpressionGene LibraryGenetic TherapyHepatitis B virusHep G2 CellsHumansInhibitor of Apoptosis ProteinsInverted Repeat SequencesRNA, Small InterferingSurvivinBIRC5 protein, humanDNA-Directed DNA PolymeraseInhibitor of Apoptosis ProteinsRNA, Small InterferingSurvivin

Identifiers

PMID25493330
PMCPMC4296746

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.